A B C D E F G H I J K L M N O P R S T U V W X Z

A

AbstractDynamicalSystem - Class in ca.nengo.dynamics.impl
Base implementation of DynamicalSystem.
AbstractDynamicalSystem(float[]) - Constructor for class ca.nengo.dynamics.impl.AbstractDynamicalSystem
 
AbstractEnsemble - Class in ca.nengo.model.impl
Abstract class that can be used as a basis for Ensemble implementations.
AbstractEnsemble(String, Node[]) - Constructor for class ca.nengo.model.impl.AbstractEnsemble
Note that setMode(SimulationMode.DEFAULT) is called at construction time.
AbstractFunction - Class in ca.nengo.math.impl
Base class for Function implementations.
AbstractFunction(int) - Constructor for class ca.nengo.math.impl.AbstractFunction
 
AbstractNode - Class in ca.nengo.model.impl
A base implementation of Node.
AbstractNode(String, List<Origin>, List<Termination>) - Constructor for class ca.nengo.model.impl.AbstractNode
 
AbstractProperty - Class in ca.nengo.config.impl
Base implementation of Property.
AbstractProperty(Configuration, String, Class<?>, boolean) - Constructor for class ca.nengo.config.impl.AbstractProperty
 
AbstractRealLearningFunction - Class in ca.nengo.model.plasticity.impl
Defines the input available to a real-valued learning rule function.
AbstractRealLearningFunction() - Constructor for class ca.nengo.model.plasticity.impl.AbstractRealLearningFunction
Ensures that the function is of the correct dimension.
AbstractSpikeLearningFunction - Class in ca.nengo.model.plasticity.impl
Defines the input available to a spike-based learning rule function.
AbstractSpikeLearningFunction() - Constructor for class ca.nengo.model.plasticity.impl.AbstractSpikeLearningFunction
Ensures that the function is of the correct dimension.
actionPerformed(ActionEvent) - Method in class ca.nengo.config.ui.ConfigurationChangeListener
 
actionPerformed(ActionEvent) - Method in class ca.nengo.config.ui.NewConfigurableDialog
 
ACTIVATION - Static variable in interface ca.nengo.model.muscle.SkeletalMuscle
 
add(String, TimeSeries) - Method in class ca.nengo.io.MatlabExporter
 
add(String, TimeSeries, float) - Method in class ca.nengo.io.MatlabExporter
Filters TimeSeries data with given time constant (this is usually a good idea for spike output, which is a sum of impulses).
add(String, SpikePattern) - Method in class ca.nengo.io.MatlabExporter
 
add(String, float[][]) - Method in class ca.nengo.io.MatlabExporter
 
add(float[]) - Method in class ca.nengo.util.MU.MatrixExpander
 
add(float) - Method in class ca.nengo.util.MU.VectorExpander
 
addBias(int, float, float, boolean, boolean) - Method in class ca.nengo.model.impl.ProjectionImpl
 
addBias(int, float, float, boolean, boolean) - Method in interface ca.nengo.model.Projection
Makes all the synaptic weights in the projection either positive or negative, so that the projection accords with Dale's principle.
addBiasOrigin(Origin, int, String, boolean) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
addBiasOrigin(Origin, int, String, boolean) - Method in interface ca.nengo.model.nef.NEFEnsemble
Adds a BiasOrigin, which operates in parallel with an existing Origin, such that the effective weights of the two origins together are all of the same sign (as is normally the case with synaptic weights in the brain).
addBiasTerminations(DecodedTermination, float, float[][], float[][]) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
addBiasTerminations(DecodedTermination, float, float[][], float[][]) - Method in interface ca.nengo.model.nef.NEFEnsemble
Adds BiasTerminations, which are meant to receive projections from BiasOrigins.
addChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
addChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.AbstractNode
 
addChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.FunctionInput
 
addChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.NetworkImpl
 
addChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.PassthroughNode
 
addChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
addChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
addChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
addChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.sim.impl.LocalSimulator
 
addChangeListener(VisiblyMutable.Listener) - Method in interface ca.nengo.util.VisiblyMutable
 
addDecodedOrigin(String, Function[], String, Network, Probe, float, float) - Method in interface ca.nengo.model.nef.DecodableEnsemble
Adds an Origin that corresponds to a decoding of the activities of Nodes in this Ensemble.
addDecodedOrigin(String, Function[], String, Network, Probe, Termination, float[][], float) - Method in interface ca.nengo.model.nef.DecodableEnsemble
Adds an Origin that corresponds to a decoding of the activities of Nodes in this Ensemble.
addDecodedOrigin(String, Function[], String, Network, Probe, float, float) - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
addDecodedOrigin(String, Function[], String, Network, Probe, Termination, float[][], float) - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
addDecodedOrigin(String, Function[], String, Network, Probe, Probe, float, float, float) - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
addDecodedOrigin(String, DecodedOrigin) - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
addDecodedOrigin(String, Function[], String) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
addDecodedOrigin(String, Function[], String) - Method in interface ca.nengo.model.nef.NEFEnsemble
Adds an Origin that corresponds to a decoding of the activities of Nodes in this Ensemble.
addDecodedTermination(String, float[][], float, boolean) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
addDecodedTermination(String, float[][], float[], float[], float, boolean) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
addDecodedTermination(String, float[][], float, boolean) - Method in interface ca.nengo.model.nef.NEFEnsemble
Adds a new Termination into this Ensemble, at which information is to be received in the form of decoded state variables rather than spikes, etc.
addDecodedTermination(String, float[][], float[], float[], float, boolean) - Method in interface ca.nengo.model.nef.NEFEnsemble
As above but with arbitrary single-input-single-output PSC dynamics.
addDecodedTermination(String, float[][], float, boolean) - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
Adds a standard decoded termination to the network
addDefaultOrigins(NEFEnsemble) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
Adds standard decoded Origins to the given NEFEnsemble This method is exposed so that it can be over-ridden to change behaviour.
addHandler(ConfigurationHandler) - Method in class ca.nengo.config.MainHandler
 
addHierarchy(Class<?>) - Method in class ca.nengo.config.ClassRegistry
As addRegisterableType(Class), but ancestors are added as well.
addNode(Node) - Method in class ca.nengo.model.impl.NetworkImpl
 
addNode(Node) - Method in interface ca.nengo.model.Network
 
addOneDimTermination(String, int, float) - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
Adds a one dimension termination to the network This allows the user to specify which dimension the input value should be stored in as opposed to sending in a weight matrix to do so A multiplier transform is also expected
addOneDimTermination(String, int) - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
Default one dimension termination with no transform Sets a default transform of 1
addProbe(String, String, boolean) - Method in class ca.nengo.sim.impl.LocalSimulator
 
addProbe(String, int, String, boolean) - Method in class ca.nengo.sim.impl.LocalSimulator
 
addProbe(String, Probeable, String, boolean) - Method in class ca.nengo.sim.impl.LocalSimulator
 
addProbe(String, String, boolean) - Method in interface ca.nengo.sim.Simulator
 
addProbe(String, int, String, boolean) - Method in interface ca.nengo.sim.Simulator
 
addProbe(String, Probeable, String, boolean) - Method in interface ca.nengo.sim.Simulator
 
addProjection(Origin, Termination) - Method in class ca.nengo.model.impl.NetworkImpl
 
addProjection(Origin, Termination) - Method in interface ca.nengo.model.Network
Connects an Origin to a Termination.
addRegisterableType(Class<?>) - Method in class ca.nengo.config.ClassRegistry
Adds a class to the list of types whose implementations can be registered (only implementations of certain types can be registered).
addSimulatorListener(SimulatorListener) - Method in class ca.nengo.sim.impl.LocalSimulator
 
addSimulatorListener(SimulatorListener) - Method in interface ca.nengo.sim.Simulator
 
addSource(File) - Static method in class ca.nengo.config.JavaSourceParser
Adds source code under the given directory to the database.
addSpike(int, float) - Method in class ca.nengo.util.impl.SpikePatternImpl
 
addTermination(String, float[][], float, boolean) - Method in interface ca.nengo.model.ExpandableNode
Adds a new Termination onto this Node.
addTermination(String, float[][], float, boolean) - Method in class ca.nengo.model.impl.EnsembleImpl
 
addTermination(String, float[][], float, boolean) - Method in class ca.nengo.model.impl.PlasticEnsembleImpl
 
addTermination(String, float[], float, boolean) - Method in interface ca.nengo.model.neuron.ExpandableSynapticIntegrator
 
addTermination(String, float[][], float, boolean) - Method in class ca.nengo.model.neuron.impl.ExpandableSpikingNeuron
 
addTermination(String, float[], float, boolean) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
addTreeModelListener(TreeModelListener) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
addValue(Object) - Method in class ca.nengo.config.impl.ListPropertyImpl
 
addValue(Object) - Method in class ca.nengo.config.impl.TemplateArrayProperty
 
addValue(Object) - Method in interface ca.nengo.config.ListProperty
 
addValue(TreePath, Object, String) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
ALIFNeuronFactory - Class in ca.nengo.model.neuron.impl
A factory for adapting leaky integrate-and-fire neurons.
ALIFNeuronFactory(PDF, PDF, PDF, float, float, float) - Constructor for class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
ALIFNeuronFactory() - Constructor for class ca.nengo.model.neuron.impl.ALIFNeuronFactory
Uses default parameters.
ALIFSpikeGenerator - Class in ca.nengo.model.neuron.impl
An adapting leaky-integrate-and-fire model of spike generation.
ALIFSpikeGenerator() - Constructor for class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
Uses default parameters
ALIFSpikeGenerator(float, float, float, float) - Constructor for class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
ALIFSpikeGenerator.Factory - Class in ca.nengo.model.neuron.impl
Creates ALIFSpikeGenerators.
ALIFSpikeGenerator.Factory() - Constructor for class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
ApproximatorFactory - Interface in ca.nengo.math
Produces LinearApproximators, which approximate Functions through a weighted sum of component functions.
AquaTreeUI - Class in ca.nengo.config.ui
To be used in place of the Mac look & feel apple.laf.AquaTreeUI (and CUIAquaTree), which seem not to respect differences in tree cell size, or to expand tree cells when they change size.
AquaTreeUI() - Constructor for class ca.nengo.config.ui.AquaTreeUI
 
areMonotonicallyIncreasing(float[]) - Static method in class ca.nengo.util.impl.StatefulIndexFinder
 
AXON - Static variable in interface ca.nengo.model.neuron.Neuron
Standard name for the primary Origin of a Neuron, which outputs its spikes or firing rate depending on SimulationMode.

B

BaseHandler - Class in ca.nengo.config.handlers
Base class that provides default behaviour for ConfigurationHandlers.
BaseHandler(Class<?>) - Constructor for class ca.nengo.config.handlers.BaseHandler
 
BasicOrigin - Class in ca.nengo.model.impl
A generic implementation of Origin.
BasicOrigin(Node, String, int, Units) - Constructor for class ca.nengo.model.impl.BasicOrigin
 
BasicTermination - Class in ca.nengo.model.impl
A basic implementation of Termination with configurable dynamics and no special integrative features.
BasicTermination(Node, DynamicalSystem, Integrator, String) - Constructor for class ca.nengo.model.impl.BasicTermination
 
beQuiet() - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
Stops the factory from printing out information to console during make process.
BIAS_SUFFIX - Static variable in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
biasIsEnabled() - Method in class ca.nengo.model.impl.ProjectionImpl
 
biasIsEnabled() - Method in interface ca.nengo.model.Projection
 
BiasOrigin - Class in ca.nengo.model.nef.impl
Part of a projection in which each of the Nodes making up an Ensemble is a source of only excitatory or inhibitory connections.
BiasOrigin(NEFEnsemble, String, Node[], String, float[][], int, boolean) - Constructor for class ca.nengo.model.nef.impl.BiasOrigin
 
BiasTermination - Class in ca.nengo.model.nef.impl
 
BiasTermination(Node, String, String, LinearSystem, Integrator, float[], boolean) - Constructor for class ca.nengo.model.nef.impl.BiasTermination
 
BooleanHandler - Class in ca.nengo.config.handlers
ConfigurationHandler for Boolean values.
BooleanHandler() - Constructor for class ca.nengo.config.handlers.BooleanHandler
 

C

ca.nengo - package ca.nengo
 
ca.nengo.config - package ca.nengo.config
 
ca.nengo.config.handlers - package ca.nengo.config.handlers
 
ca.nengo.config.impl - package ca.nengo.config.impl
 
ca.nengo.config.ui - package ca.nengo.config.ui
 
ca.nengo.dynamics - package ca.nengo.dynamics
 
ca.nengo.dynamics.impl - package ca.nengo.dynamics.impl
 
ca.nengo.io - package ca.nengo.io
 
ca.nengo.math - package ca.nengo.math
 
ca.nengo.math.impl - package ca.nengo.math.impl
 
ca.nengo.model - package ca.nengo.model
 
ca.nengo.model.impl - package ca.nengo.model.impl
 
ca.nengo.model.muscle - package ca.nengo.model.muscle
 
ca.nengo.model.muscle.impl - package ca.nengo.model.muscle.impl
 
ca.nengo.model.nef - package ca.nengo.model.nef
 
ca.nengo.model.nef.impl - package ca.nengo.model.nef.impl
 
ca.nengo.model.neuron - package ca.nengo.model.neuron
 
ca.nengo.model.neuron.impl - package ca.nengo.model.neuron.impl
 
ca.nengo.model.plasticity - package ca.nengo.model.plasticity
 
ca.nengo.model.plasticity.impl - package ca.nengo.model.plasticity.impl
 
ca.nengo.plot - package ca.nengo.plot
 
ca.nengo.plot.impl - package ca.nengo.plot.impl
 
ca.nengo.sim - package ca.nengo.sim
 
ca.nengo.sim.impl - package ca.nengo.sim.impl
 
ca.nengo.util - package ca.nengo.util
 
ca.nengo.util.impl - package ca.nengo.util.impl
 
cancelChanges() - Method in class ca.nengo.config.ui.ConfigurationChangeListener
 
canHandle(Class<?>) - Method in interface ca.nengo.config.ConfigurationHandler
 
canHandle(Class<?>) - Method in class ca.nengo.config.handlers.BaseHandler
 
canHandle(Class<?>) - Method in class ca.nengo.config.MainHandler
 
CanonicalModel - Class in ca.nengo.dynamics.impl
Utilities related to state-space models that are in controllable-canonical form.
CanonicalModel() - Constructor for class ca.nengo.dynamics.impl.CanonicalModel
 
changed(VisiblyMutable.Event) - Method in class ca.nengo.model.impl.NetworkImpl
Handles any changes/errors that may arise from objects within the network changing.
changed(VisiblyMutable.Event) - Method in interface ca.nengo.util.VisiblyMutable.Listener
 
changed(VisiblyMutable, List<VisiblyMutable.Listener>) - Static method in class ca.nengo.util.VisiblyMutableUtils
Notifies listeners of a change to the given VisiblyMutable object.
changeRange(int) - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork.PoiraziDendriteFactory
Changes the range from which the random number generator r is allowed to choose from when scaling individual dendrites
changeTimeConstant(LTISystem, float) - Static method in class ca.nengo.dynamics.impl.CanonicalModel
 
ClassRegistry - Class in ca.nengo.config
A registry of implementations of selected types of interest (subclasses and interface implementations).
ClassUtils - Class in ca.nengo.util
Class-related utility methods.
ClassUtils() - Constructor for class ca.nengo.util.ClassUtils
 
clone() - Method in interface ca.nengo.dynamics.DynamicalSystem
 
clone() - Method in class ca.nengo.dynamics.impl.AbstractDynamicalSystem
 
clone() - Method in class ca.nengo.dynamics.impl.EulerIntegrator
 
clone() - Method in class ca.nengo.dynamics.impl.LTISystem
 
clone() - Method in class ca.nengo.dynamics.impl.RK45Integrator
 
clone() - Method in interface ca.nengo.dynamics.Integrator
 
clone() - Method in interface ca.nengo.math.ApproximatorFactory
 
clone() - Method in interface ca.nengo.math.CurveFitter
 
clone() - Method in interface ca.nengo.math.Function
 
clone() - Method in class ca.nengo.math.impl.AbstractFunction
 
clone() - Method in class ca.nengo.math.impl.CompositeApproximator
 
clone() - Method in class ca.nengo.math.impl.ConstantFunction
 
clone() - Method in class ca.nengo.math.impl.Convolution
 
clone() - Method in class ca.nengo.math.impl.ExponentialPDF
 
clone() - Method in class ca.nengo.math.impl.FourierFunction
 
clone() - Method in class ca.nengo.math.impl.FunctionBasisImpl
 
clone() - Method in class ca.nengo.math.impl.GaussianPDF
 
clone() - Method in class ca.nengo.math.impl.GradientDescentApproximator
 
clone() - Method in class ca.nengo.math.impl.GradientDescentApproximator.CoefficientsSameSign
 
clone() - Method in interface ca.nengo.math.impl.GradientDescentApproximator.Constraints
 
clone() - Method in class ca.nengo.math.impl.GradientDescentApproximator.Factory
 
clone() - Method in class ca.nengo.math.impl.IdentityFunction
 
clone() - Method in class ca.nengo.math.impl.IndependentDimensionApproximator
 
clone() - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.Factory
 
clone() - Method in class ca.nengo.math.impl.IndicatorPDF
 
clone() - Method in class ca.nengo.math.impl.LinearCurveFitter
 
clone() - Method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
clone() - Method in class ca.nengo.math.impl.LinearFunction
 
clone() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction
 
clone() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 
clone() - Method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
clone() - Method in class ca.nengo.math.impl.PoissonPDF
 
clone() - Method in class ca.nengo.math.impl.Polynomial
 
clone() - Method in class ca.nengo.math.impl.PolynomialCurveFitter
 
clone() - Method in class ca.nengo.math.impl.PostfixFunction
 
clone() - Method in class ca.nengo.math.impl.SigmoidFunction
 
clone() - Method in class ca.nengo.math.impl.SineFunction
 
clone() - Method in class ca.nengo.math.impl.WeightedCostApproximator
 
clone() - Method in class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
clone() - Method in interface ca.nengo.math.LinearApproximator
 
clone() - Method in interface ca.nengo.math.PDF
 
clone() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
clone() - Method in class ca.nengo.model.impl.AbstractNode
Performs a shallow copy.
clone() - Method in class ca.nengo.model.impl.BasicOrigin
 
clone() - Method in class ca.nengo.model.impl.BasicTermination
 
clone() - Method in class ca.nengo.model.impl.EnsembleImpl
 
clone() - Method in class ca.nengo.model.impl.EnsembleOrigin
Note: the clone references the same copies of the underlying node origins.
clone() - Method in class ca.nengo.model.impl.EnsembleTermination
 
clone() - Method in class ca.nengo.model.impl.FunctionInput
 
clone() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
clone() - Method in class ca.nengo.model.impl.NetworkImpl
 
clone() - Method in class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
clone() - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
clone() - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplFunction
 
clone() - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplNull
 
clone() - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF
 
clone() - Method in class ca.nengo.model.impl.PassthroughNode
 
clone() - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
clone() - Method in class ca.nengo.model.impl.PlasticEnsembleImpl
 
clone() - Method in class ca.nengo.model.impl.PlasticEnsembleTermination
 
clone() - Method in class ca.nengo.model.impl.PreciseSpikeOutputImpl
 
clone() - Method in class ca.nengo.model.impl.ProbeableOrigin
 
clone() - Method in class ca.nengo.model.impl.RealOutputImpl
 
clone() - Method in class ca.nengo.model.impl.SpikeOutputImpl
 
clone() - Method in interface ca.nengo.model.InstantaneousOutput
 
clone() - Method in class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
clone() - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
clone() - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
clone() - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
clone() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
clone() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
clone() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
clone() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
clone() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
clone() - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
clone() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
clone() - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
clone() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
 
clone() - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator
 
clone() - Method in class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin
 
clone() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
clone() - Method in interface ca.nengo.model.neuron.SpikeGenerator
 
clone() - Method in interface ca.nengo.model.neuron.SynapticIntegrator
 
clone() - Method in interface ca.nengo.model.Node
 
clone() - Method in interface ca.nengo.model.Noise
 
clone() - Method in interface ca.nengo.model.Origin
 
clone() - Method in class ca.nengo.model.plasticity.impl.AbstractRealLearningFunction
 
clone() - Method in class ca.nengo.model.plasticity.impl.AbstractSpikeLearningFunction
 
clone() - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
clone() - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule.NullRule
 
clone() - Method in class ca.nengo.model.plasticity.impl.ErrorLearningFunction
 
clone() - Method in class ca.nengo.model.plasticity.impl.InSpikeErrorFunction
 
clone() - Method in class ca.nengo.model.plasticity.impl.OutSpikeErrorFunction
 
clone() - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
clone() - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
clone() - Method in interface ca.nengo.model.plasticity.PlasticityRule
 
clone() - Method in interface ca.nengo.model.PlasticTermination
 
clone() - Method in interface ca.nengo.model.Termination
 
clone() - Method in class ca.nengo.sim.impl.LocalSimulator
 
clone() - Method in interface ca.nengo.sim.Simulator
 
clone() - Method in class ca.nengo.util.impl.LinearInterpolatorND
 
clone() - Method in class ca.nengo.util.impl.SpikePatternImpl
 
clone() - Method in class ca.nengo.util.impl.StatefulIndexFinder
 
clone() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
clone() - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
clone() - Method in interface ca.nengo.util.IndexFinder
 
clone() - Method in interface ca.nengo.util.Interpolator
 
clone(float[][]) - Static method in class ca.nengo.util.MU
 
clone(double[][]) - Static method in class ca.nengo.util.MU
 
clone() - Method in interface ca.nengo.util.SpikePattern
 
clone() - Method in interface ca.nengo.util.TimeSeries
 
closeAll() - Static method in class ca.nengo.plot.Plotter
Close all open plots
collect(float) - Method in class ca.nengo.util.impl.ProbeImpl
 
collect(float) - Method in interface ca.nengo.util.Probe
Processes new data.
collectSpikes(boolean) - Method in interface ca.nengo.model.Ensemble
 
collectSpikes(boolean) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
commitChanges() - Method in class ca.nengo.config.ui.ConfigurationChangeListener
 
CompositeApproximator - Class in ca.nengo.math.impl
A LinearApproximator that approximates multi-dimensional functions as sums of lower-dimensional functions.
CompositeApproximator(LinearApproximator[], int[][]) - Constructor for class ca.nengo.math.impl.CompositeApproximator
 
CompositePlasticityRule - Class in ca.nengo.model.plasticity.impl
A PlasticityRule that delegates to underlying spike-based and rate-based rules.
CompositePlasticityRule(PlasticityRule, PlasticityRule) - Constructor for class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
CompositePlasticityRule() - Constructor for class ca.nengo.model.plasticity.impl.CompositePlasticityRule
Defaults to NullRules.
CompositePlasticityRule.NullRule - Class in ca.nengo.model.plasticity.impl
A null plasticity rule that always returns zeros from getDerivative().
CompositePlasticityRule.NullRule() - Constructor for class ca.nengo.model.plasticity.impl.CompositePlasticityRule.NullRule
 
ConfigExceptionHandler - Class in ca.nengo.config.ui
Handles UI-generated exceptions consistently.
ConfigExceptionHandler() - Constructor for class ca.nengo.config.ui.ConfigExceptionHandler
 
Configurable - Interface in ca.nengo.config
This interface can be implemented by objects that wish to expose a customized Configuration.
Configuration - Interface in ca.nengo.config
Contains all the variable parameters of a Configurable object.
ConfigurationChangeListener - Class in ca.nengo.config.ui
A listener for changes to Property values.
ConfigurationChangeListener(JTree, TreePath) - Constructor for class ca.nengo.config.ui.ConfigurationChangeListener
 
ConfigurationChangeListener.EditorProxy - Interface in ca.nengo.config.ui
An editor component (from ConfigurationHandler.getEditor(...)) must implement EditorProxy in order to allow retrieval of a new value when editing is complete.
ConfigurationHandler - Interface in ca.nengo.config
Manages configuration of Propertys of of a certain Class.
ConfigurationImpl - Class in ca.nengo.config.impl
Default implementation of Configuration.
ConfigurationImpl(Object) - Constructor for class ca.nengo.config.impl.ConfigurationImpl
 
ConfigurationTreeCellEditor - Class in ca.nengo.config.ui
TreeCellEditor for configuration trees.
ConfigurationTreeCellEditor(JTree) - Constructor for class ca.nengo.config.ui.ConfigurationTreeCellEditor
 
ConfigurationTreeCellRenderer - Class in ca.nengo.config.ui
Renderer for cells in a configuration tree.
ConfigurationTreeCellRenderer() - Constructor for class ca.nengo.config.ui.ConfigurationTreeCellRenderer
 
ConfigurationTreeModel - Class in ca.nengo.config.ui
Data model underlying JTree user interface for a Configurable.
ConfigurationTreeModel(Object) - Constructor for class ca.nengo.config.ui.ConfigurationTreeModel
 
ConfigurationTreeModel.NullValue - Class in ca.nengo.config.ui
For the configuration UI to use in place of a null parameter value.
ConfigurationTreeModel.NullValue() - Constructor for class ca.nengo.config.ui.ConfigurationTreeModel.NullValue
 
ConfigurationTreeModel.Value - Class in ca.nengo.config.ui
 
ConfigurationTreeModel.Value(int, Object) - Constructor for class ca.nengo.config.ui.ConfigurationTreeModel.Value
 
ConfigurationTreePopupListener - Class in ca.nengo.config.ui
Creates a popup menu for configuration tree nodes, to allow refreshing, adding/setting/removing, etc.
ConfigurationTreePopupListener(JTree, ConfigurationTreeModel) - Constructor for class ca.nengo.config.ui.ConfigurationTreePopupListener
 
configure(Dialog, Object) - Static method in class ca.nengo.config.ConfigUtil
 
configure(Frame, Object) - Static method in class ca.nengo.config.ConfigUtil
 
ConfigUtil - Class in ca.nengo.config
Configuration-related utility methods.
ConfigUtil() - Constructor for class ca.nengo.config.ConfigUtil
 
ConfigUtil.ConfigurationPane - Class in ca.nengo.config
 
ConfigUtil.ConfigurationPane(Object) - Constructor for class ca.nengo.config.ConfigUtil.ConfigurationPane
 
connect(String, Probeable, String, boolean) - Method in class ca.nengo.util.impl.ProbeImpl
 
connect(Probeable, String, boolean) - Method in class ca.nengo.util.impl.ProbeImpl
 
connect(String, Probeable, String, boolean) - Method in interface ca.nengo.util.Probe
 
connect(Probeable, String, boolean) - Method in interface ca.nengo.util.Probe
 
ConstantFunction - Class in ca.nengo.math.impl
A Function that maps everything to the same value.
ConstantFunction(int, float) - Constructor for class ca.nengo.math.impl.ConstantFunction
 
constantRateRun(float) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
construct(String, NEFNode[], float[][], ApproximatorFactory, float[][], float[]) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
This method is exposed so that it can be over-ridden to change behaviour.
convert(float[][]) - Static method in class ca.nengo.util.MU
 
convert(float[]) - Static method in class ca.nengo.util.MU
 
convert(double[][]) - Static method in class ca.nengo.util.MU
 
convert(double[]) - Static method in class ca.nengo.util.MU
 
Convolution - Class in ca.nengo.math.impl
A numerical convolution of two one-dimensional functions.
Convolution(Function, Function, float, float) - Constructor for class ca.nengo.math.impl.Convolution
 
copy(float[], int, int, int) - Static method in class ca.nengo.util.MU
 
copyInto(float[][], float[][], int, int, int) - Static method in class ca.nengo.util.MU
Unlike System.arraycopy, this function copies the source matrix into the destination while preserving the original row length.
correct(float[]) - Method in class ca.nengo.math.impl.GradientDescentApproximator.CoefficientsSameSign
 
correct(float[]) - Method in interface ca.nengo.math.impl.GradientDescentApproximator.Constraints
 
createConfigurationPane(Object) - Static method in class ca.nengo.config.ConfigUtil
Shows a tree in which object properties can be edited.
createFrame() - Method in class ca.nengo.plot.Plotter
 
createFunctionOriginDendrites() - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
Creates an origin at the dendrite level with a user specified function The value calculated at the dendrites is then transferred to the soma ensemble
CreateMatrixEditor(Object, ConfigurationChangeListener) - Method in class ca.nengo.config.handlers.MatrixHandler
 
CreateMatrixEditor(Object, ConfigurationChangeListener) - Method in class ca.nengo.config.handlers.MatrixHandlerBase
 
CreateMatrixEditor(Object, ConfigurationChangeListener) - Method in class ca.nengo.config.handlers.VectorHandler
 
CriticallyDampedMuscle - Class in ca.nengo.model.muscle.impl
A simple, phenomenological muscle model in which activation-force dynamics are modelled with a linear 2nd-order low-pass filter (see e.g.
CriticallyDampedMuscle(String, float, float) - Constructor for class ca.nengo.model.muscle.impl.CriticallyDampedMuscle
 
CURRENT - Static variable in class ca.nengo.model.neuron.impl.SpikingNeuron
Name of Origin representing unscaled and unbiased current entering the soma.
CurveFitter - Interface in ca.nengo.math
Finds a Function that fits a set of a example points in some sense (e.g.

D

DataUtils - Class in ca.nengo.util
Tools manipulating TimeSeries and SpikePattern data.
DataUtils() - Constructor for class ca.nengo.util.DataUtils
 
DecodableEnsemble - Interface in ca.nengo.model.nef
An Ensemble that produces output signals that mean something when taken together.
DecodableEnsembleImpl - Class in ca.nengo.model.nef.impl
Default implementation of DecodableEnsemble.
DecodableEnsembleImpl(String, Node[], ApproximatorFactory) - Constructor for class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
DecodedOrigin - Class in ca.nengo.model.nef.impl
An Origin of functions of the state variables of an NEFEnsemble.
DecodedOrigin(Node, String, Node[], String, Function[], LinearApproximator) - Constructor for class ca.nengo.model.nef.impl.DecodedOrigin
With this constructor, decoding vectors are generated using default settings.
DecodedOrigin(Node, String, Node[], String, Function[], float[][]) - Constructor for class ca.nengo.model.nef.impl.DecodedOrigin
With this constructor decoding vectors are specified by the caller.
DecodedTermination - Class in ca.nengo.model.nef.impl
A Termination of decoded state vectors onto an NEFEnsemble.
DecodedTermination(Node, String, float[][], LinearSystem, Integrator) - Constructor for class ca.nengo.model.nef.impl.DecodedTermination
 
DEFAULT_BUG_MESSAGE - Static variable in class ca.nengo.config.ui.ConfigExceptionHandler
 
DEFAULT_NAME - Static variable in class ca.nengo.model.impl.NetworkImpl
 
defaultConfiguration(Object) - Static method in class ca.nengo.config.ConfigUtil
 
DefaultFunctionInterpreter - Class in ca.nengo.math.impl
Default implementation of FunctionInterpreter.
DefaultFunctionInterpreter() - Constructor for class ca.nengo.math.impl.DefaultFunctionInterpreter
 
defaultNumThreads - Static variable in class ca.nengo.util.impl.NodeThreadPool
 
DefaultPlotter - Class in ca.nengo.plot.impl
Default Plotter implementation.
DefaultPlotter() - Constructor for class ca.nengo.plot.impl.DefaultPlotter
 
defineJoint(String, Function[]) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
defineMuscle(int, SkeletalMuscle, Function, Function) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
defineProperty(Property) - Method in class ca.nengo.config.impl.ConfigurationImpl
To be called by the associated Configurable, immediately after construction (once per property).
defineSingleValuedProperty(String, Class<?>, boolean) - Method in class ca.nengo.config.impl.ConfigurationImpl
 
defineTemplateProperty(String, Class<?>, Object) - Method in class ca.nengo.config.impl.ConfigurationImpl
 
DelimitedFileExporter - Class in ca.nengo.io
Exports TimeSeries, SpikePattern, and float[][] data to delimited text files.
DelimitedFileExporter() - Constructor for class ca.nengo.io.DelimitedFileExporter
Uses default column delimiter ", " and row delimiter "\r\n".
DelimitedFileExporter(String, String) - Constructor for class ca.nengo.io.DelimitedFileExporter
 
deltaOmega(float, float, float, float, float, int, int, int) - Method in class ca.nengo.model.plasticity.impl.AbstractRealLearningFunction
A learning rule that defines how the connection weight changes on each timestep (or longer, depending on the plasticity interval).
deltaOmega(float, float, float, float, int, int, int) - Method in class ca.nengo.model.plasticity.impl.AbstractSpikeLearningFunction
A learning rule that defines how the connection weight changes when a particular spike happens (either presynaptic spike or postsynaptic).
deltaOmega(float, float, float, float, float, int, int, int) - Method in class ca.nengo.model.plasticity.impl.ErrorLearningFunction
 
deltaOmega(float, float, float, float, int, int, int) - Method in class ca.nengo.model.plasticity.impl.InSpikeErrorFunction
 
deltaOmega(float, float, float, float, int, int, int) - Method in class ca.nengo.model.plasticity.impl.OutSpikeErrorFunction
 
diag(float[]) - Static method in class ca.nengo.util.MU
 
diag(float[][]) - Static method in class ca.nengo.util.MU
 
difference(float[][], float[][]) - Static method in class ca.nengo.util.MU
 
difference(float[], float[]) - Static method in class ca.nengo.util.MU
 
difference(float[]) - Static method in class ca.nengo.util.MU
 
DifferentiableFunction - Interface in ca.nengo.math
A Function with a known derivative.
DIMENSION_PROPERTY - Static variable in class ca.nengo.math.impl.AbstractFunction
 
DIMENSION_PROPERTY - Static variable in interface ca.nengo.model.Noise
 
doneOrigins() - Method in interface ca.nengo.model.nef.DecodableEnsemble
This method can optionally be called after all decoded Origins have been added, in order to free resources that are needed for adding new decodings.
doneOrigins() - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
doPlot(TimeSeries, String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doPlot(TimeSeries, TimeSeries, String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doPlot(List<TimeSeries>, List<SpikePattern>, String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doPlot(NEFEnsemble, String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doPlot(NEFEnsemble) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doPlot(SpikePattern) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doPlot(Function, float, float, float, String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doPlot(float[], String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doPlot(float[], float[], String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doPlot(TimeSeries, String) - Method in class ca.nengo.plot.Plotter
 
doPlot(TimeSeries, TimeSeries, String) - Method in class ca.nengo.plot.Plotter
 
doPlot(List<TimeSeries>, List<SpikePattern>, String) - Method in class ca.nengo.plot.Plotter
 
doPlot(NEFEnsemble, String) - Method in class ca.nengo.plot.Plotter
 
doPlot(NEFEnsemble) - Method in class ca.nengo.plot.Plotter
 
doPlot(SpikePattern) - Method in class ca.nengo.plot.Plotter
 
doPlot(Function, float, float, float, String) - Method in class ca.nengo.plot.Plotter
 
doPlot(float[], String) - Method in class ca.nengo.plot.Plotter
 
doPlot(float[], float[], String) - Method in class ca.nengo.plot.Plotter
 
doPlotMSE(NEFEnsemble, DecodedOrigin, String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
doSample() - Static method in class ca.nengo.math.impl.GaussianPDF
This method is publically exposed because normal deviates are often needed, and static access allows the compiler to inline the call, which brings a small performance advantage.
DYNAMIC_ORIGIN_NAME - Static variable in interface ca.nengo.model.muscle.MuscleSpindle
 
DYNAMIC_SPINDLE_ORIGIN - Static variable in interface ca.nengo.model.muscle.SkeletalMuscle
 
DynamicalSystem - Interface in ca.nengo.dynamics
A state-space model of a continuous-time dynamical system.
DynamicalSystemSpikeGenerator - Class in ca.nengo.model.neuron.impl
A SpikeGenerator for which spiking dynamics are expressed in terms of a DynamicalSystem.
DynamicalSystemSpikeGenerator(DynamicalSystem, Integrator, int, float, float) - Constructor for class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
DynamicalSystemSpikeGenerator(DynamicalSystem, Integrator, int, float, float, float[], float) - Constructor for class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
Creates a SpikeGenerator that supports CONSTANT_RATE mode.
DynamicalSystemSpikeGenerator() - Constructor for class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
Uses default parameters to allow later configuration.
DYNAMICS - Static variable in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 

E

enableBias(boolean) - Method in class ca.nengo.model.impl.ProjectionImpl
 
enableBias(boolean) - Method in interface ca.nengo.model.Projection
 
Ensemble - Interface in ca.nengo.model
A group of Nodes with largely overlapping inputs and outputs.
ENSEMBLE_EXTENSION - Static variable in class ca.nengo.io.FileManager
 
EnsembleImpl - Class in ca.nengo.model.impl
Default implementation of Ensemble.
EnsembleImpl(String, Node[]) - Constructor for class ca.nengo.model.impl.EnsembleImpl
 
EnsembleImpl(String, NodeFactory, int) - Constructor for class ca.nengo.model.impl.EnsembleImpl
 
EnsembleOrigin - Class in ca.nengo.model.impl
An Origin that is composed of the Origins of multiple Nodes.
EnsembleOrigin(Node, String, Origin[]) - Constructor for class ca.nengo.model.impl.EnsembleOrigin
 
EnsembleTermination - Class in ca.nengo.model.impl
A Termination that is composed of Terminations onto multiple Nodes.
EnsembleTermination(Node, String, Termination[]) - Constructor for class ca.nengo.model.impl.EnsembleTermination
 
EnumHandler - Class in ca.nengo.config.handlers
ConfigurationHandler for SimulationMode values.
EnumHandler() - Constructor for class ca.nengo.config.handlers.EnumHandler
Defaults to type Enum with null default value.
EnumHandler(Class<?>, Enum<?>) - Constructor for class ca.nengo.config.handlers.EnumHandler
 
Environment - Class in ca.nengo.util
Provides information about the context in which the code is running.
Environment() - Constructor for class ca.nengo.util.Environment
 
ErrorLearningFunction - Class in ca.nengo.model.plasticity.impl
A learning function that uses information from the ensemble to modulate the rate of synaptic change.
ErrorLearningFunction(float[], float[][]) - Constructor for class ca.nengo.model.plasticity.impl.ErrorLearningFunction
Requires information from the post population to modulate learning.
ErrorLearningFunction(float[], float[][], boolean) - Constructor for class ca.nengo.model.plasticity.impl.ErrorLearningFunction
Requires information from the post population to modulate learning.
ErrorLearningFunction(NEFEnsembleImpl) - Constructor for class ca.nengo.model.plasticity.impl.ErrorLearningFunction
Extracts information from the post population to modulate learning.
EulerIntegrator - Class in ca.nengo.dynamics.impl
Euler's method of numerical integration: x(t+h) ~ x(t) + h*x'(t) TODO: test TODO: should there be some means for aborting early (aside from exceptions, e.g.
EulerIntegrator(float) - Constructor for class ca.nengo.dynamics.impl.EulerIntegrator
 
EulerIntegrator() - Constructor for class ca.nengo.dynamics.impl.EulerIntegrator
Uses default step size of .0001
EXCITATION_TERMINATION - Static variable in interface ca.nengo.model.muscle.SkeletalMuscle
 
ExpandableNode - Interface in ca.nengo.model
A Node to which Terminations can be added after construction, in a standard manner.
ExpandableSpikingNeuron - Class in ca.nengo.model.neuron.impl
A SpikingNeuron with an ExpandableSynapticIntegrator.
ExpandableSpikingNeuron(SynapticIntegrator, SpikeGenerator, float, float, String) - Constructor for class ca.nengo.model.neuron.impl.ExpandableSpikingNeuron
Note: current = scale * (weighted sum of inputs at each termination) * (radial input) + bias.
ExpandableSynapticIntegrator - Interface in ca.nengo.model.neuron
A SynapticIntegrator to which Terminations can be added after construction, in a standard way.
ExponentialPDF - Class in ca.nengo.math.impl
A one-dimensional exponential probability density function.
ExponentialPDF(float) - Constructor for class ca.nengo.math.impl.ExponentialPDF
 
export(TimeSeries, File) - Method in class ca.nengo.io.DelimitedFileExporter
Exports a TimeSeries with times in the first column and data from each dimension in subsequent columns.
export(TimeSeries, File, float) - Method in class ca.nengo.io.DelimitedFileExporter
Exports a TimeSeries as a matrix with times in the first column and data from each dimension in subsequent rows.
export(SpikePattern, File) - Method in class ca.nengo.io.DelimitedFileExporter
Exports a SpikePattern as a matrix with spikes times of each neuron in a different row.
export(float[][], File) - Method in class ca.nengo.io.DelimitedFileExporter
Exports a matrix with rows and columns delimited as specified in the constructor.
exposeOrigin(Origin, String) - Method in class ca.nengo.model.impl.NetworkImpl
 
exposeOrigin(Origin, String) - Method in interface ca.nengo.model.Network
Declares the given Origin as available for connection outside the Network via getOrigins().
exposeState(Probeable, String, String) - Method in class ca.nengo.model.impl.NetworkImpl
 
exposeState(Probeable, String, String) - Method in interface ca.nengo.model.Network
Declares the given Probeable state as being available for Probing from outside this Network.
exposeTermination(Termination, String) - Method in class ca.nengo.model.impl.NetworkImpl
 
exposeTermination(Termination, String) - Method in interface ca.nengo.model.Network
Declares the given Termination as available for connection from outside the Network via getTerminations().
extractDimension(TimeSeries, int) - Static method in class ca.nengo.util.DataUtils
 
extractTime(TimeSeries, float, float) - Static method in class ca.nengo.util.DataUtils
 

F

f(float, float[]) - Method in interface ca.nengo.dynamics.DynamicalSystem
The dynamic equation.
f(float, float[]) - Method in class ca.nengo.dynamics.impl.AbstractDynamicalSystem
 
f(float, float[]) - Method in class ca.nengo.dynamics.impl.LTISystem
 
f(float, float[]) - Method in class ca.nengo.dynamics.impl.SimpleLTISystem
 
f(float, float[]) - Method in class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
f(float, float[]) - Method in class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem
 
FileManager - Class in ca.nengo.io
Handles saving and loading of Node TODO: a better job (this is a quick one) TODO: is there any metadata to store? TODO: test
FileManager() - Constructor for class ca.nengo.io.FileManager
 
filter(TimeSeries, float) - Static method in class ca.nengo.plot.Plotter
 
filter(TimeSeries, float) - Static method in class ca.nengo.util.DataUtils
 
findCoefficients(Function) - Method in class ca.nengo.math.impl.CompositeApproximator
 
findCoefficients(Function) - Method in class ca.nengo.math.impl.GradientDescentApproximator
 
findCoefficients(Function) - Method in class ca.nengo.math.impl.IndependentDimensionApproximator
 
findCoefficients(Function) - Method in class ca.nengo.math.impl.WeightedCostApproximator
This implementation is adapted from Eliasmith & Anderson, 2003, appendix A.
findCoefficients(Function) - Method in interface ca.nengo.math.LinearApproximator
Note: more information is needed than the arguments provide (for example the functions that are to be combined to estimate the target).
findCommon1DOrigins(Node[]) - Static method in class ca.nengo.model.impl.AbstractEnsemble
 
findIndexBelow(float) - Method in class ca.nengo.util.impl.StatefulIndexFinder
 
findIndexBelow(float) - Method in interface ca.nengo.util.IndexFinder
 
findRoot(Function, float, float, float) - Method in class ca.nengo.math.impl.NewtonRootFinder
 
findRoot(Function, float, float, float) - Method in interface ca.nengo.math.RootFinder
 
finishedANode() - Method in class ca.nengo.util.impl.NodeThreadPool
 
finishedGPUNodes() - Method in class ca.nengo.util.impl.GPUNodeThreadPool
 
finishEditing() - Method in class ca.nengo.config.ui.MatrixEditor
Stops current cell editing
finishedRun() - Method in class ca.nengo.util.impl.NodeThreadPool
 
fireSimulatorEvent(SimulatorEvent) - Method in class ca.nengo.sim.impl.LocalSimulator
 
fireVisibleChangeEvent() - Method in class ca.nengo.model.impl.AbstractEnsemble
Called by subclasses when properties have changed in such a way that the display of the ensemble may need updating.
fit(float[], float[]) - Method in interface ca.nengo.math.CurveFitter
 
fit(float[], float[]) - Method in class ca.nengo.math.impl.LinearCurveFitter
Note that inputs x must be sorted from lowest to highest.
fit(float[], float[]) - Method in class ca.nengo.math.impl.PolynomialCurveFitter
 
fixMode() - Method in class ca.nengo.model.impl.NetworkImpl
 
fixMode() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
When this method is called, the mode of this node is fixed and cannot be changed by subsequent setMode(...) calls.
FloatHandler - Class in ca.nengo.config.handlers
ConfigurationHandler for Float values.
FloatHandler() - Constructor for class ca.nengo.config.handlers.FloatHandler
 
FORCE - Static variable in interface ca.nengo.model.muscle.SkeletalMuscle
 
forName(String) - Static method in class ca.nengo.util.ClassUtils
As Class.forName(String) but arrays and primitives are also handled.
FourierFunction - Class in ca.nengo.math.impl
A Function that is composed of a finite number of sinusoids.
FourierFunction(float[], float[], float[]) - Constructor for class ca.nengo.math.impl.FourierFunction
Creates a 1-dimensional function composed of explicitly defined sinusoids.
FourierFunction(float[][], float[], float[][]) - Constructor for class ca.nengo.math.impl.FourierFunction
Creates an n-dimensional function composed of explicitly defined sinusoids.
FourierFunction(float, float, float, long, int) - Constructor for class ca.nengo.math.impl.FourierFunction
Creates a 1-dimensional band-limited noise function with specified parameters.
FourierFunction(float, float, float, long) - Constructor for class ca.nengo.math.impl.FourierFunction
Creates a 1-dimensional band-limited pink noise function with specified parameters.
fromString(String) - Method in interface ca.nengo.config.ConfigurationHandler
 
fromString(String) - Method in class ca.nengo.config.handlers.BaseHandler
 
fromString(String) - Method in class ca.nengo.config.handlers.EnumHandler
 
fromString(String) - Method in class ca.nengo.config.handlers.MatrixHandler
 
fromString(String, char, String) - Static method in class ca.nengo.config.handlers.MatrixHandler
 
fromString(String) - Method in class ca.nengo.config.handlers.UnitsHandler
 
fromString(String) - Method in class ca.nengo.config.handlers.VectorHandler
 
fromString(Class<?>, String) - Method in class ca.nengo.config.MainHandler
 
fromString(String) - Method in class ca.nengo.config.MainHandler
 
Function - Interface in ca.nengo.math
A mathematical function from an n-D space to a 1-D space.
FunctionBasis - Interface in ca.nengo.math
A list of orthogonal functions.
FunctionBasisImpl - Class in ca.nengo.math.impl
Default implementation of FunctionBasis.
FunctionBasisImpl(Function[]) - Constructor for class ca.nengo.math.impl.FunctionBasisImpl
 
FunctionInput - Class in ca.nengo.model.impl
 
FunctionInput(String, Function[], Units) - Constructor for class ca.nengo.model.impl.FunctionInput
 
FunctionInterpreter - Interface in ca.nengo.math
 

G

g(float, float[]) - Method in interface ca.nengo.dynamics.DynamicalSystem
The output equation.
g(float, float[]) - Method in class ca.nengo.dynamics.impl.AbstractDynamicalSystem
 
g(float, float[]) - Method in class ca.nengo.dynamics.impl.LTISystem
 
g(float, float[]) - Method in class ca.nengo.dynamics.impl.SimpleLTISystem
 
g(float, float[]) - Method in class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
g(float, float[]) - Method in class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem
 
GaussianPDF - Class in ca.nengo.math.impl
Univariate Gaussian probability density function.
GaussianPDF(float, float) - Constructor for class ca.nengo.math.impl.GaussianPDF
 
GaussianPDF(float, float, float) - Constructor for class ca.nengo.math.impl.GaussianPDF
Constructs a scaled Gaussian with the given peak value.
GaussianPDF() - Constructor for class ca.nengo.math.impl.GaussianPDF
Instantiates with default mean=0 and variance=1
genVectors(int, int) - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.EncoderFactory
 
genVectors(int, int) - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.EvalPointFactory
 
genVectors(int, int) - Method in class ca.nengo.util.impl.RandomHypersphereVG
 
genVectors(int, int) - Method in class ca.nengo.util.impl.Rectifier
 
genVectors(int, int) - Method in interface ca.nengo.util.VectorGenerator
The vector distribution is decided by implementing classes.
getA(float) - Method in class ca.nengo.dynamics.impl.LTISystem
 
getA() - Method in class ca.nengo.dynamics.impl.LTISystem
 
getA(float) - Method in interface ca.nengo.dynamics.LinearSystem
 
getA() - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
getA() - Method in enum ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator.Preset
 
getAdaptedRate(float) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
getAmplitude() - Method in class ca.nengo.math.impl.SineFunction
 
getAmplitudes() - Method in class ca.nengo.math.impl.FourierFunction
 
getApproximator(float[][], float[][]) - Method in interface ca.nengo.math.ApproximatorFactory
 
getApproximator(float[][], float[][]) - Method in class ca.nengo.math.impl.GradientDescentApproximator.Factory
 
getApproximator(float[][], float[][]) - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.Factory
 
getApproximator(float[][], float[][]) - Method in class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
getApproximatorFactory() - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
getApproximatorFactory() - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
getApproximatorFactory() - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
getArgDocs(Method, int) - Static method in class ca.nengo.config.JavaSourceParser
 
getArgDocs(Constructor<?>, int) - Static method in class ca.nengo.config.JavaSourceParser
 
getArgNames(Method) - Static method in class ca.nengo.config.JavaSourceParser
 
getArgNames(Constructor<?>) - Static method in class ca.nengo.config.JavaSourceParser
 
getAxisClusterFactor() - Method in class ca.nengo.util.impl.RandomHypersphereVG
 
getB(float) - Method in class ca.nengo.dynamics.impl.LTISystem
 
getB() - Method in class ca.nengo.dynamics.impl.LTISystem
 
getB(float) - Method in interface ca.nengo.dynamics.LinearSystem
 
getB() - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
getB() - Method in enum ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator.Preset
 
getBarChart(float[], String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
getBaseTerminationName() - Method in class ca.nengo.model.nef.impl.BiasTermination
 
getBasisDimension() - Method in interface ca.nengo.math.FunctionBasis
 
getBasisDimension() - Method in class ca.nengo.math.impl.FunctionBasisImpl
 
getBias() - Method in class ca.nengo.math.impl.LinearFunction
 
getBias() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getBiasEncoders() - Method in class ca.nengo.model.nef.impl.BiasTermination
 
getC(float) - Method in class ca.nengo.dynamics.impl.LTISystem
 
getC() - Method in class ca.nengo.dynamics.impl.LTISystem
 
getC(float) - Method in interface ca.nengo.dynamics.LinearSystem
 
getC() - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
getC() - Method in enum ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator.Preset
 
getCellRenderer() - Method in class ca.nengo.config.ConfigUtil.ConfigurationPane
 
getChild(Object, int) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
getChildCount(Object) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
getClosestMode(SimulationMode, SimulationMode[]) - Static method in enum ca.nengo.model.SimulationMode
A convenience method for finding the closest supported mode to a requested mode.
getCoefficients() - Method in class ca.nengo.math.impl.FunctionBasisImpl
 
getCoefficients() - Method in class ca.nengo.math.impl.Polynomial
 
getCollectSpikesRatio() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getColumnCount() - Method in class ca.nengo.config.ui.MatrixEditor
 
getComponents() - Method in class ca.nengo.math.impl.FourierFunction
 
getConfigurable() - Method in interface ca.nengo.config.Configuration
 
getConfigurable() - Method in class ca.nengo.config.impl.ConfigurationImpl
 
getConfiguration() - Method in interface ca.nengo.config.Configurable
 
getConfiguration(Object) - Static method in class ca.nengo.config.ConfigUtil
 
getConfiguration() - Method in class ca.nengo.config.impl.AbstractProperty
 
getConfiguration() - Method in class ca.nengo.config.ui.ConfigurationTreeModel.Value
 
getConfiguration() - Method in class ca.nengo.config.ui.NewConfigurableDialog.ConstructionProperties
 
getConfiguration() - Method in class ca.nengo.math.impl.FunctionBasisImpl
 
getConfiguration() - Method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
getConfiguration() - Method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
getConfiguration() - Method in class ca.nengo.model.impl.BasicOrigin
 
getConfiguration() - Method in class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
getConfiguration() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getConfiguration() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
getConstantOutput(int, float[][], String) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getConstantOutputs(float[][], String) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getConstantRateModeSupported() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getControlPanel() - Method in class ca.nengo.config.ui.MatrixEditor
 
getCostFunction(int) - Method in class ca.nengo.math.impl.WeightedCostApproximator.Factory
Note: override to use non-uniform error weighting.
getCurrentRange() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getCurrents() - Method in class ca.nengo.model.impl.PlasticEnsembleTermination
 
getCurrents() - Method in interface ca.nengo.model.PlasticTermination
 
getCurrentUnits() - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
getD(float) - Method in class ca.nengo.dynamics.impl.LTISystem
 
getD() - Method in class ca.nengo.dynamics.impl.LTISystem
 
getD(float) - Method in interface ca.nengo.dynamics.LinearSystem
 
getD() - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
getD() - Method in enum ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator.Preset
 
getData() - Method in class ca.nengo.util.impl.ProbeImpl
 
getData() - Method in interface ca.nengo.util.Probe
 
getDatabase() - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
getDecodedOrigins() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
Used to get decoded origins to give to GPU.
getDecodedTerminations() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
Used to get decoded terminations to give to GPU.
getDecoders() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getDefaultDocumentation(Method[]) - Method in class ca.nengo.config.impl.AbstractProperty
 
getDefaultLocation() - Static method in class ca.nengo.io.FileManager
 
getDefaultValue(Class<?>) - Method in interface ca.nengo.config.ConfigurationHandler
 
getDefaultValue(Class<?>) - Static method in class ca.nengo.config.ConfigUtil
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.handlers.BooleanHandler
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.handlers.EnumHandler
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.handlers.FloatHandler
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.handlers.IntegerHandler
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.handlers.LongHandler
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.handlers.MatrixHandler
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.handlers.StringHandler
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.handlers.UnitsHandler
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.handlers.VectorHandler
 
getDefaultValue() - Method in class ca.nengo.config.impl.ListPropertyImpl
 
getDefaultValue() - Method in class ca.nengo.config.impl.TemplateArrayProperty
 
getDefaultValue() - Method in interface ca.nengo.config.ListProperty
 
getDefaultValue(Class<?>) - Method in class ca.nengo.config.MainHandler
 
getDelta() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction
 
getDelta() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 
getDendrites(int) - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
 
getDensity() - Method in class ca.nengo.math.impl.IndicatorPDF
 
getDerivative() - Method in interface ca.nengo.math.DifferentiableFunction
 
getDerivative() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction
 
getDerivative() - Method in class ca.nengo.math.impl.SigmoidFunction
 
getDerivative(float[][], InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
getDerivative(float[][], InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule.NullRule
 
getDerivative(float[][], InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
getDerivative(float[][], InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
getDerivative(float[][], InstantaneousOutput, float) - Method in interface ca.nengo.model.plasticity.PlasticityRule
 
getDerivativeDimension() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction
 
getDerivativeDimension() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 
getDimension() - Method in interface ca.nengo.math.Function
 
getDimension() - Method in class ca.nengo.math.impl.AbstractFunction
 
getDimension() - Method in class ca.nengo.math.impl.ConstantFunction
 
getDimension() - Method in class ca.nengo.math.impl.FourierFunction
 
getDimension() - Method in class ca.nengo.math.impl.GaussianPDF
 
getDimension() - Method in class ca.nengo.math.impl.IdentityFunction
 
getDimension() - Method in class ca.nengo.math.impl.IndicatorPDF
 
getDimension() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction
Passed through to underlying Function.
getDimension() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 
getDimension() - Method in class ca.nengo.math.impl.PostfixFunction
 
getDimension() - Method in class ca.nengo.math.impl.SineFunction
 
getDimension() - Method in interface ca.nengo.model.ExpandableNode
 
getDimension() - Method in class ca.nengo.model.impl.EnsembleImpl
 
getDimension() - Method in class ca.nengo.model.impl.PreciseSpikeOutputImpl
 
getDimension() - Method in class ca.nengo.model.impl.RealOutputImpl
 
getDimension() - Method in class ca.nengo.model.impl.SpikeOutputImpl
 
getDimension() - Method in interface ca.nengo.model.InstantaneousOutput
 
getDimension() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getDimension() - Method in interface ca.nengo.model.nef.NEFEnsemble
 
getDimension() - Method in class ca.nengo.model.neuron.impl.ExpandableSpikingNeuron
 
getDimension() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
getDimension() - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
getDimension() - Method in interface ca.nengo.util.TimeSeries
 
getDimensions() - Method in class ca.nengo.model.impl.BasicOrigin
 
getDimensions() - Method in class ca.nengo.model.impl.BasicTermination
 
getDimensions() - Method in class ca.nengo.model.impl.EnsembleOrigin
 
getDimensions() - Method in class ca.nengo.model.impl.EnsembleTermination
 
getDimensions() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
getDimensions() - Method in class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
getDimensions() - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
getDimensions() - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
getDimensions() - Method in class ca.nengo.model.impl.ProbeableOrigin
 
getDimensions() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getDimensions() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getDimensions() - Method in class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin
 
getDimensions() - Method in interface ca.nengo.model.Origin
 
getDimensions() - Method in interface ca.nengo.model.Termination
 
getDirectModeDynamics() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getDirectModeIntegrator() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getDiscontinuities() - Method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
getDocs(Class<?>) - Static method in class ca.nengo.config.JavaSourceParser
 
getDocs(Method) - Static method in class ca.nengo.config.JavaSourceParser
 
getDocs(Constructor<?>) - Static method in class ca.nengo.config.JavaSourceParser
 
getDocumentation() - Method in class ca.nengo.config.impl.AbstractProperty
 
getDocumentation() - Method in class ca.nengo.config.impl.ListPropertyImpl
 
getDocumentation() - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
getDocumentation() - Method in class ca.nengo.config.impl.SingleValuedPropertyImpl
 
getDocumentation() - Method in interface ca.nengo.config.Property
 
getDocumentation() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getDocumentation() - Method in class ca.nengo.model.impl.AbstractNode
 
getDocumentation() - Method in class ca.nengo.model.impl.FunctionInput
 
getDocumentation() - Method in class ca.nengo.model.impl.NetworkImpl
 
getDocumentation() - Method in class ca.nengo.model.impl.PassthroughNode
 
getDocumentation() - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getDocumentation() - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
getDocumentation() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getDocumentation() - Method in interface ca.nengo.model.Node
 
getDominantTimeConstant(LTISystem) - Static method in class ca.nengo.dynamics.impl.CanonicalModel
 
getDynamics() - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF
 
getDynamics() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getDynamics() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getEditor(Object, ConfigurationChangeListener, JComponent) - Method in interface ca.nengo.config.ConfigurationHandler
 
getEditor(Object, ConfigurationChangeListener, JComponent) - Method in class ca.nengo.config.handlers.BaseHandler
Returns a JTextField.
getEditor(Object, ConfigurationChangeListener, JComponent) - Method in class ca.nengo.config.handlers.BooleanHandler
 
getEditor(Object, ConfigurationChangeListener, JComponent) - Method in class ca.nengo.config.handlers.EnumHandler
 
getEditor(Object, ConfigurationChangeListener, JComponent) - Method in class ca.nengo.config.handlers.MatrixHandlerBase
 
getEditor(Object, ConfigurationChangeListener, JComponent) - Method in class ca.nengo.config.handlers.UnitsHandler
 
getEditor(Object, ConfigurationChangeListener, JComponent) - Method in class ca.nengo.config.MainHandler
 
getEncoderFactory() - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
getEncoderFactory() - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
getEncoders() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getEncoders() - Method in interface ca.nengo.model.nef.NEFEnsemble
 
getEndTime() - Method in class ca.nengo.util.impl.NodeThreadPool
 
getEnsembleFactory() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getEnsembleFactory() - Method in interface ca.nengo.model.nef.NEFEnsemble
 
getEnsembleName() - Method in class ca.nengo.util.impl.ProbeImpl
 
getEnsembleName() - Method in interface ca.nengo.util.Probe
 
getError() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getError(int) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getEvalPointFactory() - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
getEvalPointFactory() - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
getEvalPoints() - Method in class ca.nengo.math.impl.CompositeApproximator
 
getEvalPoints() - Method in class ca.nengo.math.impl.GradientDescentApproximator
 
getEvalPoints() - Method in class ca.nengo.math.impl.IndependentDimensionApproximator
 
getEvalPoints() - Method in class ca.nengo.math.impl.WeightedCostApproximator
 
getEvalPoints() - Method in interface ca.nengo.math.LinearApproximator
 
getEvalPoints() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getExposedOriginName(Origin) - Method in class ca.nengo.model.impl.NetworkImpl
 
getExposedOriginName(Origin) - Method in interface ca.nengo.model.Network
Returns the name of the exposed origin given the inner origin.
getExposedTerminationName(Termination) - Method in class ca.nengo.model.impl.NetworkImpl
 
getExposedTerminationName(Termination) - Method in interface ca.nengo.model.Network
Returns the name of the exposed termination given the inner termination.
getExpression() - Method in class ca.nengo.math.impl.PostfixFunction
 
getExpressionList() - Method in class ca.nengo.math.impl.PostfixFunction
 
getFallbackMode() - Method in enum ca.nengo.model.SimulationMode
 
getFinder(float[]) - Method in class ca.nengo.util.impl.LinearInterpolatorND
Uses a StatefulIndexFinder by default.
getForce() - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
getForce() - Method in interface ca.nengo.model.muscle.SkeletalMuscle
 
getFrequencies() - Method in class ca.nengo.math.impl.FourierFunction
 
getFrequency() - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF
 
getFunction(int) - Method in interface ca.nengo.math.FunctionBasis
 
getFunction(int) - Method in class ca.nengo.math.impl.FunctionBasisImpl
 
getFunction() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction
 
getFunction() - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 
getFunction() - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplFunction
 
getFunction() - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
getFunctionOne() - Method in class ca.nengo.math.impl.Convolution
 
getFunctions() - Method in class ca.nengo.model.impl.FunctionInput
 
getFunctions() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getFunctionTwo() - Method in class ca.nengo.math.impl.Convolution
 
getGenerator() - Method in class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin
 
getGenerator() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getGeneratorFactory() - Method in class ca.nengo.model.neuron.impl.SpikingNeuronFactory
 
getHigh() - Method in class ca.nengo.math.impl.IndicatorPDF
 
getHigh() - Method in class ca.nengo.math.impl.SigmoidFunction
 
getHistory(String) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getHistory(String) - Method in class ca.nengo.model.impl.FunctionInput
 
getHistory(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
getHistory(String) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getHistory(String) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
getHistory(String) - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
getHistory(String) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getHistory(String) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getHistory(String) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
getHistory(String) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getHistory(String) - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
getHistory(String) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
getHistory(String) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
Available states include "I" (net current into SpikeGenerator) and the states of the SpikeGenerator.
getHistory(String) - Method in interface ca.nengo.model.Probeable
Note that the units of TimeSeries' for a given state do not change over time (ie at different time steps).
getIcon(Object) - Method in class ca.nengo.config.IconRegistry
 
getIcon(Class<?>) - Method in class ca.nengo.config.IconRegistry
 
getIdentityDimension() - Method in class ca.nengo.math.impl.IdentityFunction
 
getImplementations(Class<?>) - Method in class ca.nengo.config.ClassRegistry
 
getIncN() - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
getIncN() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
getIncN() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
getIndex() - Method in class ca.nengo.config.ui.ConfigurationTreeModel.Value
 
getIndexOfChild(Object, Object) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
getInflection() - Method in class ca.nengo.math.impl.SigmoidFunction
 
getInflection() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidFactory
 
getInitialState() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getInput() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
getInput() - Method in class ca.nengo.model.impl.PlasticEnsembleTermination
 
getInput() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getInput() - Method in interface ca.nengo.model.PlasticTermination
 
getInputDimension() - Method in interface ca.nengo.dynamics.DynamicalSystem
 
getInputDimension() - Method in class ca.nengo.dynamics.impl.AbstractDynamicalSystem
 
getInputDimension() - Method in class ca.nengo.dynamics.impl.LTISystem
 
getInputDimension() - Method in class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
getInputDimension() - Method in class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem
 
getInstance() - Static method in class ca.nengo.config.ClassRegistry
 
getInstance() - Static method in class ca.nengo.config.IconRegistry
 
getInstance() - Static method in class ca.nengo.config.MainHandler
 
getIntegrator() - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF
 
getIntegrator() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getIntegrator() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getIntegratorFactory() - Method in class ca.nengo.model.neuron.impl.SpikingNeuronFactory
 
getIntercept() - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
getIntercept() - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
getIntercept() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearFactory
 
getInterneurons() - Method in class ca.nengo.model.nef.impl.BiasOrigin
 
getJointNames() - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getJointNames() - Method in interface ca.nengo.model.muscle.LinkSegmentModel
 
getLabels() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
getLabels() - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
getLabels() - Method in interface ca.nengo.util.TimeSeries
 
getLearningRate() - Method in class ca.nengo.model.plasticity.impl.AbstractRealLearningFunction
 
getLearningRate() - Method in class ca.nengo.model.plasticity.impl.AbstractSpikeLearningFunction
 
getListProperty(Configuration, String, Class<?>) - Static method in class ca.nengo.config.impl.ListPropertyImpl
 
getLow() - Method in class ca.nengo.math.impl.IndicatorPDF
 
getLow() - Method in class ca.nengo.math.impl.SigmoidFunction
 
getMap() - Method in class ca.nengo.math.impl.LinearFunction
 
getMatrix() - Method in class ca.nengo.config.ui.MatrixEditor
 
getMaxIterations() - Method in class ca.nengo.math.impl.GradientDescentApproximator
 
getMaxRate() - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
getMaxRate() - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
getMaxRate() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearFactory
 
getMaxRate() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidFactory
 
getMaxTimeStep() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
getMaxTimeStep() - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator.Factory
 
getMaxTimeStep() - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
getMean() - Method in class ca.nengo.math.impl.GaussianPDF
 
getMessage() - Method in exception ca.nengo.model.SimulationException
Adds ensemble name to message.
getMetaData(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
getMetaData(String) - Method in interface ca.nengo.model.Network
Metadata is non-critical information about the Network (eg UI layout) that the user doesn't access directly.
getMethod(Class<?>, String[], Class<?>[], Class<?>) - Static method in class ca.nengo.config.impl.ListPropertyImpl
 
getMethod(String, String) - Static method in class ca.nengo.config.JavaSourceParser
 
getMinIntraSpikeTime() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getMode() - Method in class ca.nengo.model.impl.AbstractEnsemble
Note that this reflects the latest mode requested of the Ensemble, and that individual Neurons may run in different modes (see setMode).
getMode() - Method in class ca.nengo.model.impl.AbstractNode
 
getMode() - Method in class ca.nengo.model.impl.FunctionInput
 
getMode() - Method in class ca.nengo.model.impl.NetworkImpl
 
getMode() - Method in class ca.nengo.model.impl.PassthroughNode
 
getMode() - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getMode() - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
getMode() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getMode() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
getMode() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getMode() - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
getMode() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
getMode() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
 
getMode() - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator
 
getMode() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getMode() - Method in interface ca.nengo.model.SimulationMode.ModeConfigurable
 
getModeFixed() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getModTermName() - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
getModTermName() - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
getModulatory() - Method in class ca.nengo.model.impl.BasicTermination
 
getModulatory() - Method in class ca.nengo.model.impl.EnsembleTermination
Returns true if more than half of node terminations are modulatory.
getModulatory() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
getModulatory() - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
getModulatory() - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
getModulatory() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getModulatory() - Method in interface ca.nengo.model.Termination
 
getMuscle() - Method in interface ca.nengo.model.muscle.GolgiTendonOrgan
 
getMuscle() - Method in interface ca.nengo.model.muscle.MuscleSpindle
 
getMuscles() - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getMuscles() - Method in interface ca.nengo.model.muscle.LinkSegmentModel
 
getName() - Method in class ca.nengo.config.impl.AbstractProperty
 
getName() - Method in interface ca.nengo.config.Property
 
getName() - Method in class ca.nengo.config.ui.ConfigurationTreeModel.Value
 
getName() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getName() - Method in class ca.nengo.model.impl.AbstractNode
 
getName() - Method in class ca.nengo.model.impl.BasicOrigin
 
getName() - Method in class ca.nengo.model.impl.BasicTermination
 
getName() - Method in class ca.nengo.model.impl.EnsembleOrigin
 
getName() - Method in class ca.nengo.model.impl.EnsembleTermination
 
getName() - Method in class ca.nengo.model.impl.FunctionInput
 
getName() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
getName() - Method in class ca.nengo.model.impl.NetworkImpl
 
getName() - Method in class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
getName() - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
getName() - Method in class ca.nengo.model.impl.PassthroughNode
 
getName() - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
getName() - Method in class ca.nengo.model.impl.ProbeableOrigin
 
getName() - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getName() - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
getName() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getName() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getName() - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
 
getName() - Method in class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin
 
getName() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getName() - Method in interface ca.nengo.model.Node
 
getName() - Method in interface ca.nengo.model.Origin
 
getName() - Method in interface ca.nengo.model.Termination
 
getName(Class<?>) - Static method in class ca.nengo.util.ClassUtils
 
getName() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
getName() - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
getName() - Method in interface ca.nengo.util.TimeSeries
 
getNamedValueProperty(Configuration, String, Class<?>) - Static method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
getNetwork() - Method in class ca.nengo.model.impl.ProjectionImpl
 
getNetwork() - Method in interface ca.nengo.model.Projection
 
getNeurons() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getNewName() - Method in interface ca.nengo.util.VisiblyMutable.NameChangeEvent
 
getNextNode() - Method in class ca.nengo.util.impl.NodeThreadPool
 
getNode() - Method in class ca.nengo.model.impl.BasicOrigin
 
getNode() - Method in class ca.nengo.model.impl.BasicTermination
 
getNode() - Method in class ca.nengo.model.impl.EnsembleOrigin
 
getNode() - Method in class ca.nengo.model.impl.EnsembleTermination
 
getNode() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
getNode(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
getNode() - Method in class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
getNode() - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
getNode() - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
getNode() - Method in class ca.nengo.model.impl.ProbeableOrigin
 
getNode() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getNode() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getNode(String) - Method in interface ca.nengo.model.Network
 
getNode() - Method in class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin
 
getNode() - Method in interface ca.nengo.model.Origin
 
getNode() - Method in interface ca.nengo.model.Termination
 
getNode() - Method in interface ca.nengo.util.VisiblyMutable.NodeRemovedEvent
 
getNodeCount() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getNodeCount() - Method in interface ca.nengo.model.nef.NEFEnsemble
For changing the number of neurons in the ensemble
getNodeFactory() - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
getNodeFactory() - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
getNodeOrigin() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getNodeOrigins() - Method in class ca.nengo.model.impl.NetworkImpl
Gathers all the origins of nodes contained in this network.
getNodes() - Method in interface ca.nengo.model.Ensemble
 
getNodes() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getNodes() - Method in class ca.nengo.model.impl.NetworkImpl
 
getNodes() - Method in interface ca.nengo.model.Network
 
getNodeTerminations() - Method in class ca.nengo.model.impl.NetworkImpl
Gathers all the terminations of nodes contained in this network.
getNoise() - Method in class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
getNoise() - Method in class ca.nengo.model.impl.BasicOrigin
 
getNoise() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getNoise() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getNoise() - Method in interface ca.nengo.model.Noise.Noisy
 
getNSV() - Method in class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
getNumDiscontinuities() - Method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
getNumEvalPoints(int) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
This method is exposed so that it can be over-ridden to change behaviour.
getNumNeurons() - Method in class ca.nengo.util.impl.SpikePatternImpl
 
getNumNeurons() - Method in interface ca.nengo.util.SpikePattern
 
getNumPoints() - Method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
getNumThreads() - Static method in class ca.nengo.util.impl.NodeThreadPool
 
getNumValues() - Method in class ca.nengo.config.impl.ListPropertyImpl
 
getNumValues() - Method in class ca.nengo.config.impl.TemplateArrayProperty
 
getNumValues() - Method in interface ca.nengo.config.ListProperty
 
getObject() - Method in class ca.nengo.config.ui.ConfigurationTreeModel.Value
 
getObject() - Method in interface ca.nengo.util.VisiblyMutable.Event
 
getOldName() - Method in interface ca.nengo.util.VisiblyMutable.NameChangeEvent
 
getOmega() - Method in class ca.nengo.math.impl.SineFunction
 
getOnInSpike() - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
getOnOutSpike() - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
getOnsetRate(float) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
getOnSurface() - Method in class ca.nengo.util.impl.RandomHypersphereVG
 
getOrder() - Method in class ca.nengo.math.impl.Polynomial
 
getOrder() - Method in class ca.nengo.math.impl.PolynomialCurveFitter
 
getOrigin(String) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getOrigin(String) - Method in class ca.nengo.model.impl.AbstractNode
 
getOrigin(String) - Method in class ca.nengo.model.impl.FunctionInput
 
getOrigin(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
getOrigin(String) - Method in class ca.nengo.model.impl.PassthroughNode
 
getOrigin() - Method in class ca.nengo.model.impl.ProjectionImpl
 
getOrigin(String) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getOrigin(String) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
getOrigin(String) - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
getOrigin() - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
 
getOrigin(String) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getOrigin(String) - Method in interface ca.nengo.model.Node
 
getOrigin() - Method in interface ca.nengo.model.Projection
 
getOriginName() - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
getOriginName() - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
getOrigins() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getOrigins() - Method in class ca.nengo.model.impl.AbstractNode
 
getOrigins() - Method in class ca.nengo.model.impl.FunctionInput
 
getOrigins() - Method in class ca.nengo.model.impl.NetworkImpl
 
getOrigins() - Method in class ca.nengo.model.impl.PassthroughNode
 
getOrigins() - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getOrigins() - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
getOrigins() - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
getOrigins() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getOrigins() - Method in interface ca.nengo.model.Node
 
getOutput() - Method in class ca.nengo.model.impl.BasicTermination
Note: typically called by the Node to which the Termination belongs.
getOutput() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
getOutput() - Method in class ca.nengo.model.nef.impl.BiasTermination
 
getOutput() - Method in class ca.nengo.model.nef.impl.DecodedTermination
This method should be called after run(...).
getOutput(DecodedOrigin, float[][], SimulationMode) - Static method in class ca.nengo.model.nef.impl.NEFUtil
Calculates an instantaneous input-output mapping for an ensemble.
getOutputDimension() - Method in interface ca.nengo.dynamics.DynamicalSystem
 
getOutputDimension() - Method in class ca.nengo.dynamics.impl.AbstractDynamicalSystem
 
getOutputDimension() - Method in class ca.nengo.dynamics.impl.LTISystem
 
getOutputDimension() - Method in class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
getOutputDimension() - Method in class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem
 
getOutputUnits(int) - Method in interface ca.nengo.dynamics.DynamicalSystem
 
getOutputUnits(int) - Method in class ca.nengo.dynamics.impl.AbstractDynamicalSystem
Returns Units.UNK by default.
getOutputUnits(int) - Method in class ca.nengo.dynamics.impl.LTISystem
 
getOutputUnits(int) - Method in class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
getPDF() - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF
 
getPeak() - Method in class ca.nengo.math.impl.GaussianPDF
 
getPhases() - Method in class ca.nengo.math.impl.FourierFunction
 
getPlasticityInterval() - Method in class ca.nengo.model.impl.PlasticEnsembleImpl
 
getPlasticityInterval() - Method in interface ca.nengo.model.PlasticEnsemble
 
getPlasticityRule(String) - Method in class ca.nengo.model.impl.PlasticEnsembleImpl
 
getPlasticityRule(String) - Method in interface ca.nengo.model.PlasticEnsemble
 
getPoints() - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.EvalPointFactory
 
getPositive() - Method in class ca.nengo.util.impl.Rectifier
 
getPostfixList(String) - Method in class ca.nengo.math.impl.DefaultFunctionInterpreter
 
getPreset() - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
getPrimitiveWrapperClass(Class<?>) - Static method in class ca.nengo.config.ConfigUtil
 
getProbes() - Method in class ca.nengo.sim.impl.LocalSimulator
 
getProbes() - Method in interface ca.nengo.sim.Simulator
 
getProgress() - Method in class ca.nengo.sim.SimulatorEvent
 
getProjections() - Method in class ca.nengo.model.impl.NetworkImpl
 
getProjections() - Method in interface ca.nengo.model.Network
 
getProperty(String) - Method in interface ca.nengo.config.Configuration
 
getProperty(String) - Method in class ca.nengo.config.impl.ConfigurationImpl
 
getPropertyNames() - Method in interface ca.nengo.config.Configuration
 
getPropertyNames() - Method in class ca.nengo.config.impl.ConfigurationImpl
 
getQuiet() - Method in class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
getRadialInput(float[], int) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getRadii() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getRadii() - Method in interface ca.nengo.model.nef.NEFEnsemble
 
getRadius() - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.EncoderFactory
 
getRadius() - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.EvalPointFactory
 
getRadius() - Method in class ca.nengo.util.impl.RandomHypersphereVG
 
getRange() - Method in class ca.nengo.model.nef.impl.BiasOrigin
 
getRange(int) - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
for testing purposes
getRateFunction() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
 
getRateFunction() - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator
 
getRealization(float[], float[], float) - Static method in class ca.nengo.dynamics.impl.CanonicalModel
Realizes a transfer function in the form:
getRealRule() - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
getRectified() - Method in class ca.nengo.math.impl.LinearFunction
 
getRectified() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearFactory
 
getRectified() - Method in class ca.nengo.util.impl.Rectifier
 
getRegisterableTypes() - Method in class ca.nengo.config.ClassRegistry
 
getRegisteredFunctions() - Method in interface ca.nengo.math.FunctionInterpreter
Returns a map of registered functions.
getRegisteredFunctions() - Method in class ca.nengo.math.impl.DefaultFunctionInterpreter
 
getRenderer(Object) - Method in interface ca.nengo.config.ConfigurationHandler
 
getRenderer(Object) - Method in class ca.nengo.config.handlers.BaseHandler
 
getRenderer(Object) - Method in class ca.nengo.config.handlers.MatrixHandler
 
getRenderer(Object) - Method in class ca.nengo.config.handlers.VectorHandler
 
getRenderer(Object) - Method in class ca.nengo.config.MainHandler
 
getResult() - Method in class ca.nengo.config.ui.NewConfigurableDialog
 
getReuseApproximators() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getRoot() - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
getRowCount() - Method in class ca.nengo.config.ui.MatrixEditor
 
getRowHeight() - Method in class ca.nengo.config.ui.AquaTreeUI
 
getScale() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getScalePeakWithVariance() - Method in class ca.nengo.math.impl.GaussianPDF
 
getScales(int) - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
gets the scale values for a particular dendritic ensemble
getScaling() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getSeriesDimension() - Method in class ca.nengo.math.impl.TimeSeriesFunction
 
getSignature(Method) - Static method in class ca.nengo.config.JavaSourceParser
 
getSimulator() - Method in class ca.nengo.model.impl.NetworkImpl
 
getSimulator() - Method in interface ca.nengo.model.Network
 
getSingleValuedProperty(Configuration, String, Class<?>) - Static method in class ca.nengo.config.impl.SingleValuedPropertyImpl
 
getSlope() - Method in class ca.nengo.math.impl.SigmoidFunction
 
getSlope() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidFactory
 
getSoma() - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
 
getSpikePattern() - Method in interface ca.nengo.model.Ensemble
This method provides a means of efficiently storing the output of an Ensemble if the component Nodes have Origins that produce SpikeOutput.
getSpikePattern() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getSpikeRule() - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
getSpikeThreshold() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getSpikeTimes() - Method in class ca.nengo.model.impl.PreciseSpikeOutputImpl
 
getSpikeTimes() - Method in interface ca.nengo.model.PreciseSpikeOutput
 
getSpikeTimes(int) - Method in class ca.nengo.util.impl.SpikePatternImpl
 
getSpikeTimes(int) - Method in interface ca.nengo.util.SpikePattern
 
getStartTime() - Method in class ca.nengo.util.impl.NodeThreadPool
 
getState() - Method in interface ca.nengo.dynamics.DynamicalSystem
 
getState() - Method in class ca.nengo.dynamics.impl.AbstractDynamicalSystem
 
getState() - Method in class ca.nengo.dynamics.impl.LTISystem
 
getState() - Method in class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
getStateDimension() - Method in class ca.nengo.dynamics.impl.LTISystem
 
getStateName() - Method in class ca.nengo.util.impl.ProbeImpl
 
getStateName() - Method in interface ca.nengo.util.Probe
 
getStaticBias() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getStaticNeuronData() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
Used to get static neuron data (data that doesn't change each step) and give it to the GPU.
getStepSize() - Method in class ca.nengo.dynamics.impl.EulerIntegrator
 
getStepSize() - Method in class ca.nengo.math.impl.Convolution
 
getStepSize() - Method in class ca.nengo.model.impl.NetworkImpl
 
getSTPDynamics() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getSTPDynamics(int) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
Provides access to copy of dynamics for an individual node, to allow node-by-node parameterization.
getSTPDynamics() - Method in interface ca.nengo.model.plasticity.ShortTermPlastic
 
getSTPHistory() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getSynapticIntegrator() - Method in class ca.nengo.model.neuron.impl.ExpandableSpikingNeuron
 
getTarget() - Method in class ca.nengo.util.impl.ProbeImpl
 
getTarget() - Method in interface ca.nengo.util.Probe
 
getTau() - Method in class ca.nengo.math.impl.ExponentialPDF
 
getTau() - Method in class ca.nengo.model.impl.BasicTermination
 
getTau() - Method in class ca.nengo.model.impl.EnsembleTermination
Returns the average.
getTau() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
getTau() - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
getTau() - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
getTau() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getTau() - Method in interface ca.nengo.model.Termination
 
getTauN() - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
getTauN() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
getTauN() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
getTauRC() - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
getTauRC() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
getTauRC() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
getTauRC() - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
getTauRC() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator.Factory
 
getTauRC() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
getTauRef() - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
getTauRef() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
getTauRef() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
getTauRef() - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
getTauRef() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator.Factory
 
getTauRef() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
getTermination(String) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getTermination(String) - Method in class ca.nengo.model.impl.AbstractNode
 
getTermination(String) - Method in class ca.nengo.model.impl.EnsembleImpl
 
getTermination(String) - Method in class ca.nengo.model.impl.FunctionInput
 
getTermination(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
getTermination(String) - Method in class ca.nengo.model.impl.PassthroughNode
 
getTermination() - Method in class ca.nengo.model.impl.ProjectionImpl
 
getTermination(String) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getTermination(String) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
getTermination(String) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getTermination(String) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
getTermination(String) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getTermination(String) - Method in interface ca.nengo.model.neuron.SynapticIntegrator
 
getTermination(String) - Method in interface ca.nengo.model.Node
 
getTermination() - Method in interface ca.nengo.model.Projection
 
getTerminations() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
getTerminations() - Method in class ca.nengo.model.impl.AbstractNode
 
getTerminations() - Method in class ca.nengo.model.impl.EnsembleImpl
 
getTerminations() - Method in class ca.nengo.model.impl.FunctionInput
 
getTerminations() - Method in class ca.nengo.model.impl.NetworkImpl
 
getTerminations() - Method in class ca.nengo.model.impl.PassthroughNode
 
getTerminations() - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
getTerminations() - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
getTerminations() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
getTerminations() - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
getTerminations() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
getTerminations() - Method in interface ca.nengo.model.neuron.SynapticIntegrator
 
getTerminations() - Method in interface ca.nengo.model.Node
 
getTime() - Method in class ca.nengo.model.impl.PreciseSpikeOutputImpl
 
getTime() - Method in class ca.nengo.model.impl.RealOutputImpl
 
getTime() - Method in class ca.nengo.model.impl.SpikeOutputImpl
 
getTime() - Method in interface ca.nengo.model.InstantaneousOutput
 
getTimes() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
getTimes() - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
getTimes() - Method in interface ca.nengo.util.TimeSeries
 
getTimeSeries() - Method in class ca.nengo.math.impl.TimeSeriesFunction
 
getTolerance() - Method in class ca.nengo.dynamics.impl.RK45Integrator
 
getTolerance() - Method in class ca.nengo.math.impl.GradientDescentApproximator
 
getTorque() - Method in class ca.nengo.model.muscle.impl.HillMuscle
 
getTransform() - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
getTransform() - Method in class ca.nengo.model.impl.PlasticEnsembleTermination
 
getTransform() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
getTransform() - Method in interface ca.nengo.model.PlasticTermination
 
getTransientTime() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getTree() - Method in class ca.nengo.config.ConfigUtil.ConfigurationPane
 
getTreeCellEditorComponent(JTree, Object, boolean, boolean, boolean, int) - Method in class ca.nengo.config.ui.ConfigurationTreeCellEditor
 
getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class ca.nengo.config.ui.ConfigurationTreeCellRenderer
 
getType() - Method in class ca.nengo.config.impl.AbstractProperty
 
getType() - Method in interface ca.nengo.config.Property
 
getType() - Method in class ca.nengo.sim.SimulatorEvent
 
getTypeDescription() - Method in interface ca.nengo.model.impl.NodeFactory
 
getTypeDescription() - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
getTypeDescription() - Method in class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleyNeuronFactory
 
getTypeDescription() - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
getTypeDescription() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearNeuronFactory
 
getTypeDescription() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidNeuronFactory
 
getTypeDescription() - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork.PoiraziDendriteFactory
Returns type of node
getTypeDescription() - Method in class ca.nengo.model.neuron.impl.SpikingNeuronFactory
 
getUnits() - Method in class ca.nengo.model.impl.BasicOrigin
 
getUnits() - Method in class ca.nengo.model.impl.PreciseSpikeOutputImpl
 
getUnits() - Method in class ca.nengo.model.impl.RealOutputImpl
 
getUnits() - Method in class ca.nengo.model.impl.SpikeOutputImpl
 
getUnits() - Method in interface ca.nengo.model.InstantaneousOutput
 
getUnits() - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator.Factory
 
getUnits() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
getUnits() - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
getUnits() - Method in interface ca.nengo.util.TimeSeries
 
getUnits1D() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
getUnits1D() - Method in interface ca.nengo.util.TimeSeries1D
 
getUseGPU() - Static method in class ca.nengo.util.impl.GPUNodeThreadPool
 
getValue(int) - Method in class ca.nengo.config.impl.ListPropertyImpl
 
getValue(String) - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
getValue() - Method in class ca.nengo.config.impl.SingleValuedPropertyImpl
 
getValue(int) - Method in class ca.nengo.config.impl.TemplateArrayProperty
 
getValue() - Method in class ca.nengo.config.impl.TemplateProperty
 
getValue(int) - Method in interface ca.nengo.config.ListProperty
 
getValue(String) - Method in interface ca.nengo.config.NamedValueProperty
 
getValue() - Method in interface ca.nengo.config.SingleValuedProperty
 
getValue() - Method in interface ca.nengo.config.ui.ConfigurationChangeListener.EditorProxy
 
getValue() - Method in class ca.nengo.math.impl.ConstantFunction
 
getValue(float, float, float) - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplFunction
 
getValue(float, float, float) - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplNull
 
getValue(float, float, float) - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF
 
getValue(float, float, float) - Method in interface ca.nengo.model.Noise
 
getValueNames() - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
getValueNames() - Method in interface ca.nengo.config.NamedValueProperty
 
getValues() - Method in class ca.nengo.math.impl.CompositeApproximator
 
getValues() - Method in class ca.nengo.math.impl.GradientDescentApproximator
 
getValues() - Method in class ca.nengo.math.impl.IndependentDimensionApproximator
 
getValues() - Method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
getValues() - Method in class ca.nengo.math.impl.WeightedCostApproximator
 
getValues() - Method in interface ca.nengo.math.LinearApproximator
 
getValues() - Method in class ca.nengo.model.impl.BasicOrigin
 
getValues() - Method in class ca.nengo.model.impl.EnsembleOrigin
 
getValues() - Method in class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
getValues() - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
getValues() - Method in class ca.nengo.model.impl.PreciseSpikeOutputImpl
 
getValues() - Method in class ca.nengo.model.impl.ProbeableOrigin
 
getValues() - Method in class ca.nengo.model.impl.RealOutputImpl
 
getValues() - Method in class ca.nengo.model.impl.SpikeOutputImpl
 
getValues() - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
getValues() - Method in class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin
Returns spike values or real-valued spike rate values, depending on whether the mode is SimulationMode.DEFAULT or SimulationMode.CONSTANT_RATE.
getValues() - Method in interface ca.nengo.model.Origin
 
getValues() - Method in interface ca.nengo.model.RealOutput
 
getValues() - Method in interface ca.nengo.model.SpikeOutput
 
getValues() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
getValues() - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
getValues() - Method in interface ca.nengo.util.TimeSeries
 
getValues1D() - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
getValues1D() - Method in interface ca.nengo.util.TimeSeries1D
 
getVariance() - Method in class ca.nengo.math.impl.GaussianPDF
 
getVoltage() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
getVoltage() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
getVoltageDim() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
getWeights() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
getWeights() - Method in class ca.nengo.model.impl.ProjectionImpl
 
getWeights() - Method in interface ca.nengo.model.Projection
 
getWindow() - Method in class ca.nengo.math.impl.Convolution
 
getWrappedOrigin() - Method in class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
getWrappedTermination() - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
getX() - Method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
getY() - Method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
GolgiTendonOrgan - Interface in ca.nengo.model.muscle
A model of a golgi tendon organ receptor.
GPUNodeThreadPool - Class in ca.nengo.util.impl
 
GPUNodeThreadPool(Node[]) - Constructor for class ca.nengo.util.impl.GPUNodeThreadPool
 
GPUThread - Class in ca.nengo.util.impl
 
GradientDescentApproximator - Class in ca.nengo.math.impl
A LinearApproximator that searches for coefficients by descending an error gradient.
GradientDescentApproximator(float[][], float[][], GradientDescentApproximator.Constraints, boolean) - Constructor for class ca.nengo.math.impl.GradientDescentApproximator
 
GradientDescentApproximator.CoefficientsSameSign - Class in ca.nengo.math.impl
Forces all decoding coefficients to be >= 0.
GradientDescentApproximator.CoefficientsSameSign(boolean) - Constructor for class ca.nengo.math.impl.GradientDescentApproximator.CoefficientsSameSign
 
GradientDescentApproximator.Constraints - Interface in ca.nengo.math.impl
Enforces constraints on coefficients.
GradientDescentApproximator.Factory - Class in ca.nengo.math.impl
An ApproximatorFactory that produces GradientDescentApproximators.
GradientDescentApproximator.Factory(GradientDescentApproximator.Constraints, boolean) - Constructor for class ca.nengo.math.impl.GradientDescentApproximator.Factory
 
GTO_ORIGIN - Static variable in interface ca.nengo.model.muscle.SkeletalMuscle
 

H

handle(Exception, String, Component) - Static method in class ca.nengo.config.ui.ConfigExceptionHandler
 
HANDLERS_FILE_PROPERTY - Static variable in class ca.nengo.config.MainHandler
 
hideOrigin(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
hideOrigin(String) - Method in interface ca.nengo.model.Network
Undoes exposeOrigin(x, x, name).
hideState(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
hideState(String) - Method in interface ca.nengo.model.Network
Undoes exposeState(x, x, name).
hideTermination(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
hideTermination(String) - Method in interface ca.nengo.model.Network
Undoes exposeTermination(x, x, name).
HillMuscle - Class in ca.nengo.model.muscle.impl
A Hill-type muscle model.
HillMuscle(String, float, float, Function, Function, Function) - Constructor for class ca.nengo.model.muscle.impl.HillMuscle
 
HillMuscle.Dynamics - Class in ca.nengo.model.muscle.impl
 
HillMuscle.Dynamics(float, float, Function, Function, Function, boolean) - Constructor for class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
HodgkinHuxleySpikeGenerator - Class in ca.nengo.model.neuron.impl
A SpikeGenerator based on the Hodgkin-Huxley model.
HodgkinHuxleySpikeGenerator() - Constructor for class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator
 
HodgkinHuxleySpikeGenerator.HodgkinHuxleyNeuronFactory - Class in ca.nengo.model.neuron.impl
A factory of neurons with linear synaptic integration and Hodgkin-Huxley spike generation.
HodgkinHuxleySpikeGenerator.HodgkinHuxleyNeuronFactory() - Constructor for class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleyNeuronFactory
 
HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem - Class in ca.nengo.model.neuron.impl
Hodgkin-Huxley spiking dynamics.
HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem(float[]) - Constructor for class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem
 
HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem() - Constructor for class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem
 

I

I(int) - Static method in class ca.nengo.util.MU
 
IconRegistry - Class in ca.nengo.config
A registry of graphical Icons that can be used for displaying Property values.
IdentityFunction - Class in ca.nengo.math.impl
Identity function on a particular dimension of input, ie f(x) = x_i, where i is a constant.
IdentityFunction(int, int) - Constructor for class ca.nengo.math.impl.IdentityFunction
 
IdentityFunction() - Constructor for class ca.nengo.math.impl.IdentityFunction
Defaults to one dimension.
IMPLS_LOCATION_PROPERTY - Static variable in class ca.nengo.config.ClassRegistry
 
importAsMatrix(File) - Method in class ca.nengo.io.DelimitedFileExporter
Imports a delimited file as a matrix.
ImpulseIntegral - Class in ca.nengo.dynamics.impl
A tool for finding the integral of the impulse response of an LTI system.
ImpulseIntegral() - Constructor for class ca.nengo.dynamics.impl.ImpulseIntegral
 
IndependentDimensionApproximator - Class in ca.nengo.math.impl
A LinearApproximator for functions with no multidimensional nonlinearities.
IndependentDimensionApproximator(float[], float[][], int[], int, Function, float) - Constructor for class ca.nengo.math.impl.IndependentDimensionApproximator
 
IndependentDimensionApproximator.EncoderFactory - Class in ca.nengo.math.impl
A VectorGenerator for use with IndependentDimensionApproximator as an encoder factory.
IndependentDimensionApproximator.EncoderFactory(float) - Constructor for class ca.nengo.math.impl.IndependentDimensionApproximator.EncoderFactory
 
IndependentDimensionApproximator.EncoderFactory() - Constructor for class ca.nengo.math.impl.IndependentDimensionApproximator.EncoderFactory
Defaults to radius 1.
IndependentDimensionApproximator.EvalPointFactory - Class in ca.nengo.math.impl
A VectorGenerator for use with IndependentDimensionApproximator as an evaluation point factory.
IndependentDimensionApproximator.EvalPointFactory(float, int) - Constructor for class ca.nengo.math.impl.IndependentDimensionApproximator.EvalPointFactory
 
IndependentDimensionApproximator.Factory - Class in ca.nengo.math.impl
Factory for IndependentDimensionApproximators.
IndependentDimensionApproximator.Factory() - Constructor for class ca.nengo.math.impl.IndependentDimensionApproximator.Factory
 
IndexFinder - Interface in ca.nengo.util
Searches a monotonically increasing list of floating-point values for the largest one that is less than or equal to a requested value.
IndicatorPDF - Class in ca.nengo.math.impl
Uniform probability between upper and lower limits, zero elsewhere.
IndicatorPDF(float, float) - Constructor for class ca.nengo.math.impl.IndicatorPDF
 
IndicatorPDF(float) - Constructor for class ca.nengo.math.impl.IndicatorPDF
 
initialize(Network) - Method in class ca.nengo.sim.impl.LocalSimulator
 
initialize(Network) - Method in interface ca.nengo.sim.Simulator
Initializes the Simulator with a given Network, after which changes to the Network MAY OR MAY NOT BE IGNORED.
initialize(Node[]) - Method in class ca.nengo.util.impl.GPUNodeThreadPool
 
initialize(Node[]) - Method in class ca.nengo.util.impl.NodeThreadPool
 
insert(int, Object) - Method in class ca.nengo.config.impl.ListPropertyImpl
 
insert(int, Object) - Method in class ca.nengo.config.impl.TemplateArrayProperty
 
insert(int, Object) - Method in interface ca.nengo.config.ListProperty
 
insertValue(TreePath, Object) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
InSpikeErrorFunction - Class in ca.nengo.model.plasticity.impl
A learning function that uses information from the ensemble to modulate the rate of synaptic change.
InSpikeErrorFunction(float[], float[][], float, float, float, float) - Constructor for class ca.nengo.model.plasticity.impl.InSpikeErrorFunction
Requires information from the post population to modulate learning.
InSpikeErrorFunction(float[], float[][]) - Constructor for class ca.nengo.model.plasticity.impl.InSpikeErrorFunction
Requires information from the post population to modulate learning.
InSpikeErrorFunction(NEFEnsembleImpl) - Constructor for class ca.nengo.model.plasticity.impl.InSpikeErrorFunction
Extracts information from the post population to modulate learning.
InstantaneousOutput - Interface in ca.nengo.model
An output from an Origin at an instant in time.
IntegerHandler - Class in ca.nengo.config.handlers
ConfigurationHandler for Integer values.
IntegerHandler() - Constructor for class ca.nengo.config.handlers.IntegerHandler
 
integrate(DynamicalSystem, TimeSeries) - Method in class ca.nengo.dynamics.impl.EulerIntegrator
Linear interpolation is performed between given input points.
integrate(LTISystem) - Static method in class ca.nengo.dynamics.impl.ImpulseIntegral
 
integrate(DynamicalSystem, TimeSeries) - Method in class ca.nengo.dynamics.impl.RK45Integrator
 
integrate(DynamicalSystem, TimeSeries) - Method in interface ca.nengo.dynamics.Integrator
Integrates the given system over the time span defined by the input time series.
Integrator - Interface in ca.nengo.dynamics
A numerical integrator of ordinary differential equations.
INTERNEURON_SUFFIX - Static variable in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
interpolate(float[], float[], float) - Static method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
interpolate(float) - Method in class ca.nengo.util.impl.LinearInterpolatorND
 
interpolate(float) - Method in interface ca.nengo.util.Interpolator
 
interpolate(float) - Method in interface ca.nengo.util.InterpolatorND
 
Interpolator - Interface in ca.nengo.util
A tool for interpolating within a SCALAR time series (see also InterpolatorND for vector time series').
InterpolatorND - Interface in ca.nengo.util
A tool for interpolating within a VECTOR time series (see also Interpolator for scalar time series').
inUserInterface() - Static method in class ca.nengo.util.Environment
 
isCellEditable(EventObject) - Method in class ca.nengo.config.ui.ConfigurationTreeCellEditor
 
isChangeCancelled() - Method in class ca.nengo.config.ui.ConfigurationChangeListener
 
isChangeCommited() - Method in class ca.nengo.config.ui.ConfigurationChangeListener
 
isCollectingSpikes() - Method in interface ca.nengo.model.Ensemble
 
isCollectingSpikes() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
isControllableCanonical(LTISystem) - Static method in class ca.nengo.dynamics.impl.CanonicalModel
 
isEnabled() - Method in class ca.nengo.model.nef.impl.BiasTermination
 
isFixedCardinality() - Method in class ca.nengo.config.impl.ListPropertyImpl
 
isFixedCardinality() - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
isFixedCardinality() - Method in class ca.nengo.config.impl.SingleValuedPropertyImpl
 
isFixedCardinality() - Method in class ca.nengo.config.impl.TemplateArrayProperty
 
isFixedCardinality() - Method in class ca.nengo.config.impl.TemplateProperty
 
isFixedCardinality() - Method in interface ca.nengo.config.Property
 
isGPUNode() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
isInEnsemble() - Method in class ca.nengo.util.impl.ProbeImpl
 
isInEnsemble() - Method in interface ca.nengo.util.Probe
 
isLeaf(Object) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
isMatrix(float[][]) - Static method in class ca.nengo.util.MU
 
isMultithreading() - Static method in class ca.nengo.util.impl.NodeThreadPool
 
isMutable() - Method in class ca.nengo.config.impl.AbstractProperty
 
isMutable() - Method in class ca.nengo.config.impl.ListPropertyImpl
 
isMutable() - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
isMutable() - Method in interface ca.nengo.config.Property
 
isNamedAutomatically() - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
isNamedAutomatically() - Method in interface ca.nengo.config.NamedValueProperty
 
isSleeping - Variable in class ca.nengo.util.impl.NodeThreadPool
 
IzhikevichSpikeGenerator - Class in ca.nengo.model.neuron.impl
From Izhikevich, 2003, the model is:
v' = 0.04v*v + 5v + 140 - u + I
u' = a(bv - u)
IzhikevichSpikeGenerator() - Constructor for class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
Constructor using "default" parameters
IzhikevichSpikeGenerator(IzhikevichSpikeGenerator.Preset) - Constructor for class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
IzhikevichSpikeGenerator(float, float, float, float) - Constructor for class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
IzhikevichSpikeGenerator(float, float, float, float, float) - Constructor for class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
IzhikevichSpikeGenerator.Preset - Enum in ca.nengo.model.neuron.impl
Preset parameter values corresponding to different cell types.

J

JavaSourceParser - Class in ca.nengo.config
Utilities for extracting data from Java source code files, including variable names and documentation.
JavaSourceParser() - Constructor for class ca.nengo.config.JavaSourceParser
 

K

kill() - Method in class ca.nengo.util.impl.GPUNodeThreadPool
 
kill() - Method in class ca.nengo.util.impl.NodeThreadPool
 
killNeurons(float) - Method in class ca.nengo.model.impl.NetworkImpl
Kills a certain percentage of neurons in the network (recursively including subnetworks).
killNeurons(float, boolean) - Method in class ca.nengo.model.impl.NetworkImpl
Kills a certain percentage of neurons in the network (recursively including subnetworks).
killNeurons(float, boolean) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
Stops a given percentage of neurons in this population from firing.

L

LENGTH - Static variable in interface ca.nengo.model.muscle.SkeletalMuscle
 
LIFNeuronFactory - Class in ca.nengo.model.neuron.impl
A factory for leaky-integrate-and-fire neurons.
LIFNeuronFactory(float, float, PDF, PDF) - Constructor for class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
LIFNeuronFactory() - Constructor for class ca.nengo.model.neuron.impl.LIFNeuronFactory
Uses default parameters.
LIFSpikeGenerator - Class in ca.nengo.model.neuron.impl
A leaky-integrate-and-fire model of spike generation.
LIFSpikeGenerator() - Constructor for class ca.nengo.model.neuron.impl.LIFSpikeGenerator
Uses default values.
LIFSpikeGenerator(float, float, float) - Constructor for class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
LIFSpikeGenerator(float, float, float, float) - Constructor for class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
LIFSpikeGenerator.Factory - Class in ca.nengo.model.neuron.impl
Creates LIFSpikeGenerators.
LIFSpikeGenerator.Factory() - Constructor for class ca.nengo.model.neuron.impl.LIFSpikeGenerator.Factory
 
LinearApproximator - Interface in ca.nengo.math
Finds coefficients on a set of functions so that their linear combination approximates a target Function.
LinearCurveFitter - Class in ca.nengo.math.impl
Interpolates linearly between example points.
LinearCurveFitter() - Constructor for class ca.nengo.math.impl.LinearCurveFitter
 
LinearCurveFitter.InterpolatedFunction - Class in ca.nengo.math.impl
A 1-D Function based on interpolation between known points.
LinearCurveFitter.InterpolatedFunction(float[], float[]) - Constructor for class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
LinearExponentialTermination - Class in ca.nengo.model.impl
A Termination at which incoming spikes induce exponentially decaying post-synaptic currents that are combined linearly.
LinearExponentialTermination(Node, String, float[], float) - Constructor for class ca.nengo.model.impl.LinearExponentialTermination
 
LinearFunction - Class in ca.nengo.math.impl
A linear map into one dimension.
LinearFunction(float[], float, boolean) - Constructor for class ca.nengo.math.impl.LinearFunction
 
LinearInterpolatorND - Class in ca.nengo.util.impl
Interpolates linearly between adjacent values of a vector time series.
LinearInterpolatorND(TimeSeries) - Constructor for class ca.nengo.util.impl.LinearInterpolatorND
 
LinearSynapticIntegrator - Class in ca.nengo.model.neuron.impl
A basic linear SynapticIntegrator model.
LinearSynapticIntegrator(float, Units) - Constructor for class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
LinearSynapticIntegrator() - Constructor for class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
Defaults to max timestep 1ms and units Units.ACU.
LinearSynapticIntegrator.Factory - Class in ca.nengo.model.neuron.impl
 
LinearSynapticIntegrator.Factory() - Constructor for class ca.nengo.model.neuron.impl.LinearSynapticIntegrator.Factory
 
LinearSystem - Interface in ca.nengo.dynamics
A linear dynamical system, which may or may not be time-varying.
LinkSegmentModel - Interface in ca.nengo.model.muscle
TODO: javadocs
LinkSegmentModelImpl - Class in ca.nengo.model.muscle.impl
Default implementation of LinkSegmentModel.
LinkSegmentModelImpl(String, DynamicalSystem, float) - Constructor for class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
ListProperty - Interface in ca.nengo.config
A Property that can have multiple values, each of which is identified by an integer index.
ListPropertyImpl - Class in ca.nengo.config.impl
Default implementation of ListProperty.
ListPropertyImpl(Configuration, String, Class<?>, Method) - Constructor for class ca.nengo.config.impl.ListPropertyImpl
 
ListPropertyImpl(Configuration, String, Class<?>, Method, Method) - Constructor for class ca.nengo.config.impl.ListPropertyImpl
 
listStates() - Method in class ca.nengo.model.impl.AbstractEnsemble
 
listStates() - Method in class ca.nengo.model.impl.FunctionInput
 
listStates() - Method in class ca.nengo.model.impl.NetworkImpl
 
listStates() - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
listStates() - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
listStates() - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
listStates() - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
listStates() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
listStates() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
listStates() - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
listStates() - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
listStates() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
listStates() - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
listStates() - Method in interface ca.nengo.model.Probeable
 
load(File) - Method in class ca.nengo.io.FileManager
 
LocalSimulator - Class in ca.nengo.sim.impl
A Simulator that runs locally (ie in the Java Virtual Machine in which it is called).
LocalSimulator() - Constructor for class ca.nengo.sim.impl.LocalSimulator
 
LongHandler - Class in ca.nengo.config.handlers
ConfigurationHandler for Long values.
LongHandler() - Constructor for class ca.nengo.config.handlers.LongHandler
 
LTISystem - Class in ca.nengo.dynamics.impl
A linear time-invariant dynamical system model in state-space form.
LTISystem(float[][], float[][], float[][], float[][], float[], Units[]) - Constructor for class ca.nengo.dynamics.impl.LTISystem
Each argument is an array of arrays that represents a matrix.

M

main(String[]) - Static method in class ca.nengo.config.ui.ConfigurationTreeModel
 
main(String[]) - Static method in class ca.nengo.math.impl.Convolution
 
main(String[]) - Static method in class ca.nengo.math.impl.ExponentialPDF
 
main(String[]) - Static method in class ca.nengo.math.impl.IndependentDimensionApproximator
 
main(String[]) - Static method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
main(String[]) - Static method in class ca.nengo.math.impl.PolynomialCurveFitter
 
main(String[]) - Static method in class ca.nengo.math.impl.TimeSeriesFunction
 
main(String[]) - Static method in class ca.nengo.model.impl.NoiseFactory
 
main(String[]) - Static method in class ca.nengo.model.muscle.impl.HillMuscle
 
main(String[]) - Static method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
main(String[]) - Static method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
 
main(String[]) - Static method in class ca.nengo.model.neuron.impl.SpikingNeuronFactory
 
MainHandler - Class in ca.nengo.config
A composite ConfigurationHandler which delegates to other underlying ConfigurationHandlers that can handle specific classes.
make(String) - Method in interface ca.nengo.model.impl.NodeFactory
 
make(String, int, int) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
make(String, int, float[]) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
make(String, int, int, String, boolean) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
make(String, int, float[], String, boolean) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
make(String, int, int) - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
make(String, int, float[]) - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
make(String, int, float[], String, boolean) - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
Loads an NEFEnsemble, or creates and saves it.
make(String, int, int, String, boolean) - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
Loads an NEFEnsemble, or creates and saves it.
make(String) - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
make() - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
make(String) - Method in class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleyNeuronFactory
 
make(String) - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
make() - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator.Factory
 
make() - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator.Factory
 
make() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearFactory
 
make(String) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearNeuronFactory
 
make() - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidFactory
 
make(String) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidNeuronFactory
 
make(String) - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork.PoiraziDendriteFactory
Makes a "Dendrite" Node
make() - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator.PoiraziDendriteSigmoidFactory
 
make() - Method in interface ca.nengo.model.neuron.impl.SpikeGeneratorFactory
 
make(String) - Method in class ca.nengo.model.neuron.impl.SpikingNeuronFactory
 
make() - Method in interface ca.nengo.model.neuron.impl.SynapticIntegratorFactory
 
makeExplicitNoise(Function) - Static method in class ca.nengo.model.impl.NoiseFactory
 
makeNetwork() - Method in class ca.nengo.model.neuron.impl.PyramidalNetwork
Creates nodes and calls methods to make all origins, terminations, and projections
makeNullNoise() - Static method in class ca.nengo.model.impl.NoiseFactory
 
makeRandomNoise(float, PDF) - Static method in class ca.nengo.model.impl.NoiseFactory
 
makeRandomNoise(float, PDF, DynamicalSystem, Integrator) - Static method in class ca.nengo.model.impl.NoiseFactory
 
makeSeries(Function, float, float, float, Units) - Static method in class ca.nengo.math.impl.TimeSeriesFunction
 
makeVariableNameValid(String) - Static method in class ca.nengo.io.MatlabExporter
 
makeVector(float, float, float) - Static method in class ca.nengo.util.MU
 
map(float[]) - Method in interface ca.nengo.math.Function
 
map(float[]) - Method in class ca.nengo.math.impl.AbstractFunction
 
map(float[]) - Method in class ca.nengo.math.impl.ConstantFunction
 
map(float[]) - Method in class ca.nengo.math.impl.Convolution
 
map(float[]) - Method in class ca.nengo.math.impl.ExponentialPDF
 
map(float[]) - Method in class ca.nengo.math.impl.FourierFunction
 
map(float[]) - Method in class ca.nengo.math.impl.FunctionBasisImpl
 
map(float[]) - Method in class ca.nengo.math.impl.GaussianPDF
 
map(float[]) - Method in class ca.nengo.math.impl.IdentityFunction
 
map(float[]) - Method in class ca.nengo.math.impl.IndicatorPDF
 
map(float[]) - Method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
map(float[]) - Method in class ca.nengo.math.impl.LinearFunction
 
map(float[]) - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction
Passed through to underlying Function.
map(float[]) - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 
map(float[]) - Method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
map(float[]) - Method in class ca.nengo.math.impl.PoissonPDF
 
map(float[]) - Method in class ca.nengo.math.impl.Polynomial
 
map(float[]) - Method in class ca.nengo.math.impl.PostfixFunction
 
map(float[]) - Method in class ca.nengo.math.impl.SigmoidFunction
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Acos
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Asin
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Atan
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Cos
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Exp
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Fold
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.InverseNormal
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Ln
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Log10
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Log2
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Max
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Min
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Normal
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Pow
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Sin
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Sqrt
 
map(float[]) - Method in class ca.nengo.math.impl.SimpleFunctions.Tan
 
map(float[]) - Method in class ca.nengo.math.impl.SineFunction
 
map(float[]) - Method in class ca.nengo.math.impl.TimeSeriesFunction
 
map(float[]) - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator.PoiraziDendriteSigmoid
 
map(float[]) - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator.PoiraziSomaSigmoid
 
map(float[]) - Method in class ca.nengo.model.plasticity.impl.AbstractRealLearningFunction
Calls deltaOmega.
map(float[]) - Method in class ca.nengo.model.plasticity.impl.AbstractSpikeLearningFunction
Calls deltaOmega.
MatlabExporter - Class in ca.nengo.io
A tool for exporting data to Matlab .mat files.
MatlabExporter() - Constructor for class ca.nengo.io.MatlabExporter
 
MatrixEditor - Class in ca.nengo.config.ui
An UI component for editing matrices.
MatrixEditor(float[][]) - Constructor for class ca.nengo.config.ui.MatrixEditor
Creates an editor for the given matrix.
MatrixEditor(float[][], boolean, boolean) - Constructor for class ca.nengo.config.ui.MatrixEditor
 
MatrixHandler - Class in ca.nengo.config.handlers
ConfigurationHandler for float[][] values.
MatrixHandler() - Constructor for class ca.nengo.config.handlers.MatrixHandler
 
MatrixHandlerBase - Class in ca.nengo.config.handlers
 
MatrixHandlerBase(Class<?>) - Constructor for class ca.nengo.config.handlers.MatrixHandlerBase
 
max(float[]) - Static method in class ca.nengo.util.MU
 
max(float[][]) - Static method in class ca.nengo.util.MU
 
mean(float[]) - Static method in class ca.nengo.util.MU
 
mean(float[][]) - Static method in class ca.nengo.util.MU
 
Memory - Class in ca.nengo.util
Internal tools for checking memory usage.
Memory() - Constructor for class ca.nengo.util.Memory
 
min(float[]) - Static method in class ca.nengo.util.MU
 
min(float[][]) - Static method in class ca.nengo.util.MU
 
mousePressed(MouseEvent) - Method in class ca.nengo.config.ui.ConfigurationTreePopupListener
 
mouseReleased(MouseEvent) - Method in class ca.nengo.config.ui.ConfigurationTreePopupListener
 
MU - Class in ca.nengo.util
"Matrix Utilities".
MU() - Constructor for class ca.nengo.util.MU
 
MU.MatrixExpander - Class in ca.nengo.util
A tool for growing matrices (similar to java.util.List).
MU.MatrixExpander() - Constructor for class ca.nengo.util.MU.MatrixExpander
 
MU.VectorExpander - Class in ca.nengo.util
A tool for growing vectors (similar to java.util.List).
MU.VectorExpander() - Constructor for class ca.nengo.util.MU.VectorExpander
 
multiMap(float[][]) - Method in interface ca.nengo.math.Function
 
multiMap(float[][]) - Method in class ca.nengo.math.impl.AbstractFunction
 
multiMap(float[][]) - Method in class ca.nengo.math.impl.ConstantFunction
 
multiMap(float[][]) - Method in class ca.nengo.math.impl.FourierFunction
 
multiMap(float[][]) - Method in class ca.nengo.math.impl.GaussianPDF
 
multiMap(float[][]) - Method in class ca.nengo.math.impl.IdentityFunction
 
multiMap(float[][]) - Method in class ca.nengo.math.impl.IndicatorPDF
 
multiMap(float[][]) - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction
Passed through to underlying Function.
multiMap(float[][]) - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 
multiMap(float[][]) - Method in class ca.nengo.math.impl.PostfixFunction
 
multiMap(float[][]) - Method in class ca.nengo.math.impl.SineFunction
 
MuscleSpindle - Interface in ca.nengo.model.muscle
A model of a muscle spindle receptor.
myDecodedOrigins - Variable in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
myEndTime - Variable in class ca.nengo.util.impl.NodeThreadPool
 
myExpandableNodes - Variable in class ca.nengo.model.impl.EnsembleImpl
 
myExpandedTerminations - Variable in class ca.nengo.model.impl.EnsembleImpl
 
myGPUNodes - Variable in class ca.nengo.util.impl.GPUNodeThreadPool
 
myGPUThreadCondition - Variable in class ca.nengo.util.impl.GPUNodeThreadPool
 
myGPUThreadLock - Variable in class ca.nengo.util.impl.GPUNodeThreadPool
 
myGPUThreadSleeping - Variable in class ca.nengo.util.impl.GPUNodeThreadPool
 
myKill - Variable in class ca.nengo.util.impl.NodeThreadPool
 
myLearningRate - Variable in class ca.nengo.model.plasticity.impl.AbstractRealLearningFunction
 
myLearningRate - Variable in class ca.nengo.model.plasticity.impl.AbstractSpikeLearningFunction
 
myLock - Variable in class ca.nengo.util.impl.NodeThreadPool
 
myModulatory - Variable in class ca.nengo.model.impl.BasicTermination
 
myName - Variable in enum ca.nengo.model.Units
 
myNativeThread - Variable in class ca.nengo.util.impl.GPUNodeThreadPool
 
myNodeArray - Variable in class ca.nengo.util.impl.NodeThreadPool
 
myNodes - Variable in class ca.nengo.model.impl.AbstractEnsemble
 
myNodes - Variable in class ca.nengo.util.impl.NodeThreadPool
 
myNodeTerminations - Variable in class ca.nengo.model.impl.EnsembleTermination
 
myNodeThreads - Variable in class ca.nengo.util.impl.NodeThreadPool
 
myNumGPUNodes - Variable in class ca.nengo.util.impl.GPUNodeThreadPool
 
myNumNodesProcessed - Variable in class ca.nengo.util.impl.NodeThreadPool
 
myNumNodesRequired - Variable in class ca.nengo.util.impl.NodeThreadPool
 
myNumThreads - Static variable in class ca.nengo.util.impl.NodeThreadPool
 
myOutput - Variable in class ca.nengo.model.impl.BasicTermination
 
mySignal - Variable in class ca.nengo.util.impl.GPUNodeThreadPool
 
myStartTime - Variable in class ca.nengo.util.impl.NodeThreadPool
 
myTerminations - Variable in class ca.nengo.model.impl.AbstractEnsemble
 
myUseGPU - Static variable in class ca.nengo.util.impl.GPUNodeThreadPool
 

N

nameChanged(VisiblyMutable, String, String, List<VisiblyMutable.Listener>) - Static method in class ca.nengo.util.VisiblyMutableUtils
 
NamedValueProperty - Interface in ca.nengo.config
A property that can have multiple values, each of which is indexed by a String name.
NamedValuePropertyImpl - Class in ca.nengo.config.impl
Default implementation of NamedValueProperty.
NamedValuePropertyImpl(Configuration, String, Class<?>, Method, Method) - Constructor for class ca.nengo.config.impl.NamedValuePropertyImpl
 
NamedValuePropertyImpl(Configuration, String, Class<?>, Method) - Constructor for class ca.nengo.config.impl.NamedValuePropertyImpl
 
NEFEnsemble - Interface in ca.nengo.model.nef
A group of Nodes that represent a scalar, vector, or function, as characterized in Eliasmith & Anderson's Neural Engineering Framework.
NEFEnsembleFactory - Interface in ca.nengo.model.nef
Provides a convenient and configurable way to create NEFEnsembles.
NEFEnsembleFactoryImpl - Class in ca.nengo.model.nef.impl
Default implementation of NEFEnsembleFactory.
NEFEnsembleFactoryImpl() - Constructor for class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
NEFEnsembleImpl - Class in ca.nengo.model.nef.impl
Default implementation of NEFEnsemble.
NEFEnsembleImpl(String, NEFNode[], float[][], ApproximatorFactory, float[][], float[]) - Constructor for class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
NEFNode - Interface in ca.nengo.model.nef
A Node with a distinguished Termination that corresponds to a net effect of input.
NEFUtil - Class in ca.nengo.model.nef.impl
Utility methods for related to Neural Engineering Framework.
NEFUtil() - Constructor for class ca.nengo.model.nef.impl.NEFUtil
 
NengoException - Exception in ca.nengo
A Computational Neuroscience exception.
NengoException(String) - Constructor for exception ca.nengo.NengoException
 
NengoException(Throwable) - Constructor for exception ca.nengo.NengoException
 
NengoException(String, Throwable) - Constructor for exception ca.nengo.NengoException
 
Network - Interface in ca.nengo.model
A neural circuit, consisting of Nodes such as Ensembles and ExternalInputs.
NetworkImpl - Class in ca.nengo.model.impl
Default implementation of Network.
NetworkImpl() - Constructor for class ca.nengo.model.impl.NetworkImpl
 
NetworkImpl.OriginWrapper - Class in ca.nengo.model.impl
Wraps an Origin with a new name (for exposing outside Network).
NetworkImpl.OriginWrapper(Node, Origin, String) - Constructor for class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
NetworkImpl.OriginWrapper() - Constructor for class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
NetworkImpl.TerminationWrapper - Class in ca.nengo.model.impl
Wraps a Termination with a new name (for exposing outside Network).
NetworkImpl.TerminationWrapper(Node, Termination, String) - Constructor for class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
Neuron - Interface in ca.nengo.model.neuron
A model of a single neuron cell.
NewConfigurableDialog - Class in ca.nengo.config.ui
A dialog box through which the user can construct a new object.
NewConfigurableDialog.ConstructionProperties - Class in ca.nengo.config.ui
 
NewtonRootFinder - Class in ca.nengo.math.impl
Root finder that uses Newton's method.
NewtonRootFinder(int, boolean) - Constructor for class ca.nengo.math.impl.NewtonRootFinder
 
Node - Interface in ca.nengo.model
A part of a Network that can be run independently (eg a Neuron).
NodeFactory - Interface in ca.nengo.model.impl
Produces Nodes.
nodeRemoved(VisiblyMutable, Node, List<VisiblyMutable.Listener>) - Static method in class ca.nengo.util.VisiblyMutableUtils
Notifies listeners that a node has been removed within the given object.
NodeThread - Class in ca.nengo.util.impl
 
NodeThread(NodeThreadPool) - Constructor for class ca.nengo.util.impl.NodeThread
 
NodeThreadPool - Class in ca.nengo.util.impl
A pool of threads for running nodes in.
NodeThreadPool() - Constructor for class ca.nengo.util.impl.NodeThreadPool
 
NodeThreadPool(Node[]) - Constructor for class ca.nengo.util.impl.NodeThreadPool
 
Noise - Interface in ca.nengo.model
An model of noise that can be explicitly injected into a circuit (e.g.
Noise.Noisy - Interface in ca.nengo.model
An object that implements this interface is subject to Noise.
NoiseFactory - Class in ca.nengo.model.impl
Default additive Noise implementations.
NoiseFactory() - Constructor for class ca.nengo.model.impl.NoiseFactory
 
NoiseFactory.NoiseImplFunction - Class in ca.nengo.model.impl
Note: there are no public setters here for the same reason as in NoiseImplPDF.
NoiseFactory.NoiseImplFunction(Function) - Constructor for class ca.nengo.model.impl.NoiseFactory.NoiseImplFunction
 
NoiseFactory.NoiseImplFunction() - Constructor for class ca.nengo.model.impl.NoiseFactory.NoiseImplFunction
Default zero noise.
NoiseFactory.NoiseImplNull - Class in ca.nengo.model.impl
 
NoiseFactory.NoiseImplNull() - Constructor for class ca.nengo.model.impl.NoiseFactory.NoiseImplNull
 
NoiseFactory.NoiseImplPDF - Class in ca.nengo.model.impl
Note: setters are private, because Origins typically make copies for each output dimension, which would then not be updated with changes to the original.
NoiseFactory.NoiseImplPDF(float, PDF, DynamicalSystem, Integrator) - Constructor for class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF
 
normalize(float[]) - Static method in class ca.nengo.util.MU
 
NumericallyDifferentiableFunction - Class in ca.nengo.math.impl
A wrapper around any Function that provides a numerical approximation of its derivative, so that it can be used as a DifferentiableFunction.
NumericallyDifferentiableFunction(Function, int, float) - Constructor for class ca.nengo.math.impl.NumericallyDifferentiableFunction
 
NumericallyDifferentiableFunction() - Constructor for class ca.nengo.math.impl.NumericallyDifferentiableFunction
Uses dummy parameters to allow setting after construction.
NumericallyDifferentiableFunction.NumericalDerivative - Class in ca.nengo.math.impl
 
NumericallyDifferentiableFunction.NumericalDerivative(Function, int, float) - Constructor for class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 

O

oldNumThreads - Variable in class ca.nengo.util.impl.GPUNodeThreadPool
 
optimizeDecoders(float[][], float[], boolean) - Method in class ca.nengo.model.nef.impl.BiasOrigin
This method adjusts bias decoders so that the bias function is as flat as possible, without changing the bias encoders on the post-synaptic ensemble.
optimizeInterneuronDomain(DecodedTermination, DecodedTermination) - Method in class ca.nengo.model.nef.impl.BiasOrigin
This method adjusts the interneuron channel so that the interneurons are tuned to the range of values that is output by the bias function.
OrderedOrigins - Variable in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
OrderedTerminations - Variable in class ca.nengo.model.impl.EnsembleImpl
 
ORIGIN - Static variable in class ca.nengo.model.impl.PassthroughNode
 
Origin - Interface in ca.nengo.model
An source of information in a circuit model.
ORIGIN_NAME - Static variable in class ca.nengo.model.impl.FunctionInput
 
ORIGIN_NAME - Static variable in interface ca.nengo.model.muscle.GolgiTendonOrgan
 
outerprod(float[], float[]) - Static method in class ca.nengo.util.MU
 
OUTPUT - Static variable in class ca.nengo.model.nef.impl.DecodedTermination
Name of Probeable output state.
OutSpikeErrorFunction - Class in ca.nengo.model.plasticity.impl
A learning function that uses information from the ensemble to modulate the rate of synaptic change.
OutSpikeErrorFunction(float[], float[][], float, float, float, float) - Constructor for class ca.nengo.model.plasticity.impl.OutSpikeErrorFunction
Requires information from the post population to modulate learning.
OutSpikeErrorFunction(float[], float[][]) - Constructor for class ca.nengo.model.plasticity.impl.OutSpikeErrorFunction
Requires information from the post population to modulate learning.
OutSpikeErrorFunction(NEFEnsembleImpl) - Constructor for class ca.nengo.model.plasticity.impl.OutSpikeErrorFunction
Extracts information from the post population to modulate learning.

P

parse(String, int) - Method in interface ca.nengo.math.FunctionInterpreter
Parses a mathematical expression into a Function instance.
parse(String, int) - Method in class ca.nengo.math.impl.DefaultFunctionInterpreter
 
PassthroughNode - Class in ca.nengo.model.impl
A Node that passes values through unaltered.
PassthroughNode(String, int) - Constructor for class ca.nengo.model.impl.PassthroughNode
Constructor for a simple passthrough with single input.
PassthroughNode(String, int, Map<String, float[][]>) - Constructor for class ca.nengo.model.impl.PassthroughNode
Constructor for a summing junction with multiple inputs.
PassthroughNode.PassthroughTermination - Class in ca.nengo.model.impl
 
PassthroughNode.PassthroughTermination(Node, String, int) - Constructor for class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
PassthroughNode.PassthroughTermination(Node, String, int, float[][]) - Constructor for class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
PDF - Interface in ca.nengo.math
Probability density function.
PDFTools - Class in ca.nengo.math
Convenience methods for using PDFs.
PDFTools() - Constructor for class ca.nengo.math.PDFTools
 
PiecewiseConstantFunction - Class in ca.nengo.math.impl
A one-dimensional function for which the output is constant between a finite number of discontinuities.
PiecewiseConstantFunction(float[], float[]) - Constructor for class ca.nengo.math.impl.PiecewiseConstantFunction
 
PlasticEnsemble - Interface in ca.nengo.model
An extension of the default ensemble in which connection weights can be modified by a plasticity rule.
PlasticEnsembleImpl - Class in ca.nengo.model.impl
An extension of the default ensemble; connection weights can be modified by a plasticity rule.
PlasticEnsembleImpl(String, Node[]) - Constructor for class ca.nengo.model.impl.PlasticEnsembleImpl
 
PlasticEnsembleImpl(String, NodeFactory, int) - Constructor for class ca.nengo.model.impl.PlasticEnsembleImpl
 
PlasticEnsembleTermination - Class in ca.nengo.model.impl
A Termination that is composed of Terminations onto multiple Nodes.
PlasticEnsembleTermination(Node, String, LinearExponentialTermination[]) - Constructor for class ca.nengo.model.impl.PlasticEnsembleTermination
 
PlasticityRule - Interface in ca.nengo.model.plasticity
Specifies how the termination weights of a PlasticEnsemble are modified depending on presynaptic and postsynaptic state.
PlasticTermination - Interface in ca.nengo.model
Plasticity rules apply to terminations.
plot(TimeSeries, String) - Static method in class ca.nengo.plot.Plotter
Static convenience method for producing a TimeSeries plot.
plot(TimeSeries, float, String) - Static method in class ca.nengo.plot.Plotter
As plot(TimeSeries) but series is filtered before plotting.
plot(TimeSeries, TimeSeries, String) - Static method in class ca.nengo.plot.Plotter
Plots ideal and actual TimeSeries' together.
plot(List<TimeSeries>, List<SpikePattern>, String) - Static method in class ca.nengo.plot.Plotter
Plots multiple TimeSeries and/or SpikePatterns together in the same plot.
plot(TimeSeries, TimeSeries, float, String) - Static method in class ca.nengo.plot.Plotter
Plots ideal and actual TimeSeries' together, with each series filtered before plotting.
plot(NEFEnsemble, String) - Static method in class ca.nengo.plot.Plotter
Static convenience method for producing a decoding error plot of an NEFEnsemble origin.
plot(NEFEnsemble) - Static method in class ca.nengo.plot.Plotter
Static convenience method for producing a plot of CONSTANT_RATE responses over range of inputs.
plot(SpikePattern) - Static method in class ca.nengo.plot.Plotter
Static convenience method for plotting a spike raster.
plot(Function, float, float, float, String) - Static method in class ca.nengo.plot.Plotter
Static convenience method for plotting a Function.
plot(float[], String) - Static method in class ca.nengo.plot.Plotter
Static convenience method for plotting a vector.
plot(float[], float[], String) - Static method in class ca.nengo.plot.Plotter
Static convenience method for plotting a vector.
Plotter - Class in ca.nengo.plot
Factory for frequently-used plots.
Plotter() - Constructor for class ca.nengo.plot.Plotter
 
pnorm(float[], int) - Static method in class ca.nengo.util.MU
 
PoissonPDF - Class in ca.nengo.math.impl
A Poisson distribution.
PoissonPDF(float) - Constructor for class ca.nengo.math.impl.PoissonPDF
 
PoissonSpikeGenerator - Class in ca.nengo.model.neuron.impl
A phenomenological SpikeGenerator that produces spikes according to a Poisson process with a rate that varies as a function of current.
PoissonSpikeGenerator(Function) - Constructor for class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
 
PoissonSpikeGenerator() - Constructor for class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
Uses a default sigmoid rate function
PoissonSpikeGenerator.LinearFactory - Class in ca.nengo.model.neuron.impl
Creates PoissonSpikeGenerators with linear response functions.
PoissonSpikeGenerator.LinearFactory() - Constructor for class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearFactory
 
PoissonSpikeGenerator.LinearNeuronFactory - Class in ca.nengo.model.neuron.impl
A factory for neurons with linear or rectified linear response functions.
PoissonSpikeGenerator.LinearNeuronFactory(PDF, PDF, boolean) - Constructor for class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearNeuronFactory
 
PoissonSpikeGenerator.SigmoidFactory - Class in ca.nengo.model.neuron.impl
 
PoissonSpikeGenerator.SigmoidFactory() - Constructor for class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidFactory
 
PoissonSpikeGenerator.SigmoidNeuronFactory - Class in ca.nengo.model.neuron.impl
A factory for neurons with sigmoid response functions.
PoissonSpikeGenerator.SigmoidNeuronFactory(PDF, PDF, PDF) - Constructor for class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidNeuronFactory
Neurons from this factory will have Poisson firing rates that are sigmoidal functions of current.
Polynomial - Class in ca.nengo.math.impl
A one-dimensional polynomial Function.
Polynomial(float[]) - Constructor for class ca.nengo.math.impl.Polynomial
 
PolynomialCurveFitter - Class in ca.nengo.math.impl
A least-squares polynomial CurveFitter.
PolynomialCurveFitter(int) - Constructor for class ca.nengo.math.impl.PolynomialCurveFitter
 
PostfixFunction - Class in ca.nengo.math.impl
A Function based on a mathematical expression and on other functions.
PostfixFunction(List<Serializable>, String, int) - Constructor for class ca.nengo.math.impl.PostfixFunction
 
PostfixFunction(String, int) - Constructor for class ca.nengo.math.impl.PostfixFunction
 
PreciseSpikeOutput - Interface in ca.nengo.model
InstantaneousOutput consisting of spikes and the time since they occurred.
PreciseSpikeOutputImpl - Class in ca.nengo.model.impl
 
PreciseSpikeOutputImpl(float[], Units, float) - Constructor for class ca.nengo.model.impl.PreciseSpikeOutputImpl
 
Probe - Interface in ca.nengo.util
Reads state variables from Probeable objects (eg membrane potential from a Neuron).
Probeable - Interface in ca.nengo.model
An object that can be probed for a history of its state OVER THE MOST RECENT NETWORK TIME STEP.
ProbeableOrigin - Class in ca.nengo.model.impl
An Origin that obtains output from an underlying Probeable object.
ProbeableOrigin(Node, Probeable, String, int, String) - Constructor for class ca.nengo.model.impl.ProbeableOrigin
 
ProbeImpl - Class in ca.nengo.util.impl
Collects information from Probeable objects.
ProbeImpl() - Constructor for class ca.nengo.util.impl.ProbeImpl
 
processEvent(SimulatorEvent) - Method in class ca.nengo.sim.impl.WriteToDiskSimulatorListener
 
processEvent(SimulatorEvent) - Method in interface ca.nengo.sim.SimulatorListener
 
prod(float[], float) - Static method in class ca.nengo.util.MU
 
prod(float[], float[]) - Static method in class ca.nengo.util.MU
 
prod(float[][], float[]) - Static method in class ca.nengo.util.MU
 
prod(float[][], float[][]) - Static method in class ca.nengo.util.MU
 
prod(float[][], float) - Static method in class ca.nengo.util.MU
 
prodElementwise(float[], float[]) - Static method in class ca.nengo.util.MU
 
prodElementwise(float[][], float[][]) - Static method in class ca.nengo.util.MU
 
Projection - Interface in ca.nengo.model
A connection between an Origin and a Termination.
ProjectionImpl - Class in ca.nengo.model.impl
Default implementation of Projection.
ProjectionImpl(Origin, Termination, Network) - Constructor for class ca.nengo.model.impl.ProjectionImpl
 
Property - Interface in ca.nengo.config
An element of a Configuration; wraps some property of an object (eg a bean-pattern property).
propertyChange(String, Object) - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
pseudoInverse(double[][], float, int) - Method in class ca.nengo.math.impl.WeightedCostApproximator
Override this method to use a different pseudoinverse implementation (eg clustered).
PyramidalNetwork - Class in ca.nengo.model.neuron.impl
Non Linear Network This network is a model of Pyramidal Cells found in the central nervous system These cells contain an active dendritic tree with functional computation occuring within the dendrites themselves The implementation chosen involves creating a network of Ensembles(dendrites and cell bodies) such that one ensemble of "dendrites" projects to a specific termination in the "soma" ensemble with weights chosen in such a way that only one node of the soma is given an input from a specific dendritic branch.
PyramidalNetwork(String, int, int, IndicatorPDF, String, boolean, boolean, boolean) - Constructor for class ca.nengo.model.neuron.impl.PyramidalNetwork
 
PyramidalNetwork(String, int, int, IndicatorPDF, String, boolean) - Constructor for class ca.nengo.model.neuron.impl.PyramidalNetwork
 
PyramidalNetwork(String, int, int, IndicatorPDF, String) - Constructor for class ca.nengo.model.neuron.impl.PyramidalNetwork
 
PyramidalNetwork(String, int, int, IndicatorPDF) - Constructor for class ca.nengo.model.neuron.impl.PyramidalNetwork
 
PyramidalNetwork(String, int, int) - Constructor for class ca.nengo.model.neuron.impl.PyramidalNetwork
Gives a default subunit size of 100
PyramidalNetwork(String, int) - Constructor for class ca.nengo.model.neuron.impl.PyramidalNetwork
Gives a default number of 20 neurons and 100 dendrites per neuron
PyramidalNetwork(String) - Constructor for class ca.nengo.model.neuron.impl.PyramidalNetwork
Gives a default of 1 dimension
PyramidalNetwork() - Constructor for class ca.nengo.model.neuron.impl.PyramidalNetwork
Default constructor
PyramidalNetwork.PoiraziDendriteFactory - Class in ca.nengo.model.neuron.impl
Creates neurons which are meant to model the dendrites of pyramidal cells Code is a modified version of NodeFactory written by Bryann Tripp
PyramidalNetwork.PoiraziDendriteFactory() - Constructor for class ca.nengo.model.neuron.impl.PyramidalNetwork.PoiraziDendriteFactory
Default constructor Sets spikegenerator factory to a PoiraziDendriteSigmoidFactory

R

random() - Static method in class ca.nengo.math.PDFTools
Use this rather than Math.random(), to allow user to reproduce random results by setting the seed.
random(int, int, PDF) - Static method in class ca.nengo.util.MU
 
RandomHypersphereVG - Class in ca.nengo.util.impl
Generates random vectors distributed on or in a hypersphere.
RandomHypersphereVG(boolean, float, float) - Constructor for class ca.nengo.util.impl.RandomHypersphereVG
 
RandomHypersphereVG() - Constructor for class ca.nengo.util.impl.RandomHypersphereVG
Uses default settings (on surface; radius 1; no axis cluster)
RateFunctionSpikeGenerator - Class in ca.nengo.model.neuron.impl
 
RateFunctionSpikeGenerator(Function) - Constructor for class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator
 
RateFunctionSpikeGenerator.PoiraziDendriteSigmoid - Class in ca.nengo.model.neuron.impl
 
RateFunctionSpikeGenerator.PoiraziDendriteSigmoid() - Constructor for class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator.PoiraziDendriteSigmoid
 
RateFunctionSpikeGenerator.PoiraziDendriteSigmoidFactory - Class in ca.nengo.model.neuron.impl
 
RateFunctionSpikeGenerator.PoiraziDendriteSigmoidFactory() - Constructor for class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator.PoiraziDendriteSigmoidFactory
 
RateFunctionSpikeGenerator.PoiraziSomaSigmoid - Class in ca.nengo.model.neuron.impl
 
RateFunctionSpikeGenerator.PoiraziSomaSigmoid() - Constructor for class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator.PoiraziSomaSigmoid
 
RealOutput - Interface in ca.nengo.model
Instantaneous output consisting of continuous quantities (e.g.
RealOutputImpl - Class in ca.nengo.model.impl
Default implementation of RealOutput.
RealOutputImpl(float[], Units, float) - Constructor for class ca.nengo.model.impl.RealOutputImpl
 
RealPlasticityRule - Class in ca.nengo.model.plasticity.impl
A basic implementation of PlasticityRule for real valued input.
RealPlasticityRule(AbstractRealLearningFunction, String, String) - Constructor for class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
rebuildDecoder(LinearApproximator) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
Recalculates the decoders
Rectifier - Class in ca.nengo.util.impl
Wraps an underlying VectorGenerator, rectifying generated vectors before they are returned.
Rectifier(VectorGenerator) - Constructor for class ca.nengo.util.impl.Rectifier
 
Rectifier(VectorGenerator, boolean) - Constructor for class ca.nengo.util.impl.Rectifier
 
redefineNodes(Node[]) - Method in interface ca.nengo.model.Ensemble
Replaces the set of nodes inside the Ensemble
redefineNodes(Node[]) - Method in class ca.nengo.model.impl.AbstractEnsemble
Replaces the set of nodes inside the Ensemble
redefineNodes(Node[], LinearApproximator) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
Changes the set of nodes and recalculates the decoders
refresh(TreePath) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
register(Class<?>) - Method in class ca.nengo.config.ClassRegistry
Registers an implementation against any of the registerable types which it is assignable from.
register(String) - Method in class ca.nengo.config.ClassRegistry
As register(Class), but by name.
register(JarFile) - Method in class ca.nengo.config.ClassRegistry
Registers public, non-abstract classes in the given Jar.
registerFunction(String, Function) - Method in interface ca.nengo.math.FunctionInterpreter
Registers a non-standard function for use in future interpretation of function expressions.
registerFunction(String, Function) - Method in class ca.nengo.math.impl.DefaultFunctionInterpreter
 
releaseMemory() - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
Releases any memory that can be freed.
releaseMemory() - Method in interface ca.nengo.model.nef.NEFEnsemble
Releases any memory that can be freed.
remove(int) - Method in class ca.nengo.config.impl.ListPropertyImpl
 
remove(int) - Method in class ca.nengo.config.impl.TemplateArrayProperty
 
remove(int) - Method in interface ca.nengo.config.ListProperty
 
removeAll() - Method in class ca.nengo.io.MatlabExporter
Clears all variables
removeBias() - Method in class ca.nengo.model.impl.ProjectionImpl
 
removeBias() - Method in interface ca.nengo.model.Projection
Deletes bias-related interneurons, projections, origins, and terminations.
removeChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
removeChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.AbstractNode
 
removeChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.FunctionInput
 
removeChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.NetworkImpl
 
removeChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.impl.PassthroughNode
 
removeChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
removeChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
removeChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
removeChangeListener(VisiblyMutable.Listener) - Method in class ca.nengo.sim.impl.LocalSimulator
 
removeChangeListener(VisiblyMutable.Listener) - Method in interface ca.nengo.util.VisiblyMutable
 
removeDecodedOrigin(String) - Method in interface ca.nengo.model.nef.DecodableEnsemble
 
removeDecodedOrigin(String) - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
removeDecodedTermination(String) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
removeDecodedTermination(String) - Method in interface ca.nengo.model.nef.NEFEnsemble
 
removeNode(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
removeNode(String) - Method in interface ca.nengo.model.Network
 
removeProbe(Probe) - Method in class ca.nengo.sim.impl.LocalSimulator
 
removeProbe(Probe) - Method in interface ca.nengo.sim.Simulator
 
removeProjection(Termination) - Method in class ca.nengo.model.impl.NetworkImpl
 
removeProjection(Termination) - Method in interface ca.nengo.model.Network
 
removeProperty(String) - Method in class ca.nengo.config.impl.ConfigurationImpl
 
removeRegisteredFunction(String) - Method in interface ca.nengo.math.FunctionInterpreter
Removes a registered function.
removeRegisteredFunction(String) - Method in class ca.nengo.math.impl.DefaultFunctionInterpreter
 
removeSimulatorListener(SimulatorListener) - Method in class ca.nengo.sim.impl.LocalSimulator
 
removeSimulatorListener(SimulatorListener) - Method in interface ca.nengo.sim.Simulator
 
removeTags(String) - Static method in class ca.nengo.config.JavaSourceParser
 
removeTermination(String) - Method in interface ca.nengo.model.ExpandableNode
 
removeTermination(String) - Method in class ca.nengo.model.impl.EnsembleImpl
 
removeTermination(String) - Method in interface ca.nengo.model.neuron.ExpandableSynapticIntegrator
 
removeTermination(String) - Method in class ca.nengo.model.neuron.impl.ExpandableSpikingNeuron
 
removeTermination(String) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
removeTreeModelListener(TreeModelListener) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
removeValue(String) - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
removeValue(String) - Method in interface ca.nengo.config.NamedValueProperty
Removes a value by name
removeValue(TreePath) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
renameProperty(String, String) - Method in class ca.nengo.config.impl.ConfigurationImpl
 
report(String) - Static method in class ca.nengo.util.Memory
Prints a message to the console regarding current memory usage.
rescaleDecoders(float[]) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
Rescales the decoders.
reset(boolean) - Method in class ca.nengo.model.impl.AbstractEnsemble
Resets each Node in this Ensemble.
reset(boolean) - Method in class ca.nengo.model.impl.AbstractNode
Does nothing.
reset(boolean) - Method in class ca.nengo.model.impl.BasicOrigin
 
reset(boolean) - Method in class ca.nengo.model.impl.BasicTermination
 
reset(boolean) - Method in class ca.nengo.model.impl.EnsembleTermination
 
reset(boolean) - Method in class ca.nengo.model.impl.FunctionInput
This method does nothing, as the FunctionInput has no state.
reset(boolean) - Method in class ca.nengo.model.impl.LinearExponentialTermination
Resets current to 0 (randomize arg is ignored).
reset(boolean) - Method in class ca.nengo.model.impl.NetworkImpl
 
reset(boolean) - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
reset(boolean) - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplFunction
 
reset(boolean) - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplNull
 
reset(boolean) - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF
 
reset(boolean) - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
reset(boolean) - Method in class ca.nengo.model.impl.PassthroughNode
 
reset(boolean) - Method in class ca.nengo.model.impl.PlasticEnsembleImpl
 
reset(boolean) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
reset(boolean) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
reset(boolean) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
reset(boolean) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
reset(boolean) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
reset(boolean) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
reset(boolean) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
reset(boolean) - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
reset(boolean) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
reset(boolean) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
reset(boolean) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
This method does nothing, because a Poisson process is stateless.
reset(boolean) - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator
useless method for current implementations
reset(boolean) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
reset(boolean) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule.NullRule
 
reset(boolean) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
reset(boolean) - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
reset(boolean) - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
reset(boolean) - Method in interface ca.nengo.model.Resettable
 
reset() - Method in class ca.nengo.util.impl.ProbeImpl
 
reset() - Method in interface ca.nengo.util.Probe
Clears collected data.
resetNetwork(boolean, boolean) - Method in class ca.nengo.sim.impl.LocalSimulator
 
resetNetwork(boolean, boolean) - Method in interface ca.nengo.sim.Simulator
Resets all Nodes in the simulated Network.
resetProbes() - Method in class ca.nengo.sim.impl.LocalSimulator
 
resetProbes() - Method in interface ca.nengo.sim.Simulator
Resets all probes in the network, recursively including subnetworks.
Resettable - Interface in ca.nengo.model
An object that can be reset to some initial state.
RK45Integrator - Class in ca.nengo.dynamics.impl
A variable-timestep Integrator, which uses the Dormand-Prince 4th and 5th-order Runge-Kutta formulae.
RK45Integrator(float) - Constructor for class ca.nengo.dynamics.impl.RK45Integrator
 
RK45Integrator() - Constructor for class ca.nengo.dynamics.impl.RK45Integrator
Uses default error tolerance of 1e-6
RootFinder - Interface in ca.nengo.math
Finds a root of a function.
round(float[]) - Static method in class ca.nengo.util.MU
 
run(float, float) - Method in class ca.nengo.model.impl.AbstractEnsemble
Runs each neuron in the Ensemble.
run(float, float) - Method in class ca.nengo.model.impl.AbstractNode
Does nothing.
run(float, float) - Method in class ca.nengo.model.impl.BasicTermination
Runs the Termination, making a TimeSeries of output from this Termination available from getOutput().
run(float, float) - Method in class ca.nengo.model.impl.FunctionInput
 
run(float, float) - Method in class ca.nengo.model.impl.NetworkImpl
 
run(float, float, boolean) - Method in class ca.nengo.model.impl.NetworkImpl
Runs the model with the optional parameter topLevel.
run(float, float) - Method in class ca.nengo.model.impl.PassthroughNode
 
run(float, float) - Method in class ca.nengo.model.impl.PlasticEnsembleImpl
 
run(float, float) - Method in class ca.nengo.model.muscle.impl.HillMuscle
 
run(float, float) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
run(float, float) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
run(float, float) - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
 
run(float[], float, float) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
Must be called at each time step after Nodes are run and before getValues().
run(float, float) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
run(float, float) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
run(float[], float[]) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
run(float[], float[]) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
Runs the spike generation dynamics and returns a spike if membrane potential rises above spike threshold.
run(float[], float[]) - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
run(float[], float[]) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
run(float, float) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
run(float[], float[]) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
 
run(float[], float[]) - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator
 
run(float[], float[]) - Method in class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin
 
run(float, float) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
run(float[], float[]) - Method in interface ca.nengo.model.neuron.SpikeGenerator
Runs the model for a given time segment.
run(float, float) - Method in interface ca.nengo.model.neuron.SynapticIntegrator
Runs the model for a given time interval.
run(float, float) - Method in interface ca.nengo.model.Node
Runs the Node (including all its components), updating internal state and outputs as needed.
run(float, float, float) - Method in class ca.nengo.sim.impl.LocalSimulator
 
run(float, float, float, boolean) - Method in class ca.nengo.sim.impl.LocalSimulator
Run function with option to display (or not) the progress in the console
run(float, float, float) - Method in interface ca.nengo.sim.Simulator
Runs the Network for the given time range.
run(float, float, float, boolean) - Method in interface ca.nengo.sim.Simulator
Runs the Network for the given time range.
run() - Method in class ca.nengo.util.impl.GPUThread
 
run() - Method in class ca.nengo.util.impl.NodeThread
 

S

sample() - Method in class ca.nengo.math.impl.ExponentialPDF
 
sample() - Method in class ca.nengo.math.impl.GaussianPDF
 
sample() - Method in class ca.nengo.math.impl.IndicatorPDF
 
sample() - Method in class ca.nengo.math.impl.PoissonPDF
 
sample() - Method in interface ca.nengo.math.PDF
 
sampleBoolean(PDF) - Static method in class ca.nengo.math.PDFTools
Note: PDF treated as univariate (only first dimension considered).
sampleFloat(PDF) - Static method in class ca.nengo.math.PDFTools
Note: PDF treated as univariate (only first dimension considered).
sampleInt(PDF) - Static method in class ca.nengo.math.PDFTools
Note: PDF treated as univariate (only first dimension considered).
save(Node, File) - Method in class ca.nengo.io.FileManager
 
save(TimeSeries, File) - Method in class ca.nengo.io.FileManager
 
saveTransform() - Method in class ca.nengo.model.impl.PlasticEnsembleTermination
 
saveTransform() - Method in interface ca.nengo.model.PlasticTermination
Save the current transformation, for resetting purposes.
saveWeights() - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
setA(float[][]) - Method in class ca.nengo.dynamics.impl.LTISystem
 
setA(float[][]) - Method in class ca.nengo.dynamics.impl.SimpleLTISystem
 
setA(float) - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
setAmplitude(float) - Method in class ca.nengo.math.impl.SineFunction
 
setAmplitudes(float[]) - Method in class ca.nengo.math.impl.FourierFunction
 
setApproximatorFactory(ApproximatorFactory) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
setApproximatorFactory(ApproximatorFactory) - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
setArraySetter(Method) - Method in class ca.nengo.config.impl.ListPropertyImpl
 
setAxisClusterFactor(float) - Method in class ca.nengo.util.impl.RandomHypersphereVG
 
setB(float[][]) - Method in class ca.nengo.dynamics.impl.LTISystem
 
setB(float[][]) - Method in class ca.nengo.dynamics.impl.SimpleLTISystem
 
setB(float) - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
setBias(float) - Method in class ca.nengo.math.impl.LinearFunction
 
setBias(float) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
setC(float[][]) - Method in class ca.nengo.dynamics.impl.LTISystem
 
setC(float[][]) - Method in class ca.nengo.dynamics.impl.SimpleLTISystem
 
setC(float) - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
setCoefficients(float[]) - Method in interface ca.nengo.math.FunctionBasis
 
setCoefficients(float[]) - Method in class ca.nengo.math.impl.FunctionBasisImpl
 
setCoefficients(float[]) - Method in class ca.nengo.math.impl.Polynomial
 
setCollectSpikesRatio(int) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
setCurrentRange(float[]) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
setCurrentUnits(Units) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
setD(float[][]) - Method in class ca.nengo.dynamics.impl.LTISystem
 
setD(float) - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
setDatabase(File) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
setDecoders(float[][]) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
setDefaultLocation(File) - Static method in class ca.nengo.io.FileManager
 
setDelta(float) - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 
setDerivativeDimension(int) - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative
 
setDimension(int) - Method in class ca.nengo.math.impl.ConstantFunction
 
setDimension(int) - Method in class ca.nengo.math.impl.IdentityFunction
 
setDimension(int) - Method in class ca.nengo.math.impl.PostfixFunction
 
setDimensions(int) - Method in class ca.nengo.model.impl.BasicOrigin
 
setDirectModeDynamics(DynamicalSystem) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
setDirectModeIntegrator(Integrator) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
setDiscontinuities(float[]) - Method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
setDisplayProgress(boolean) - Method in class ca.nengo.sim.impl.LocalSimulator
 
setDocumentation(String) - Method in class ca.nengo.config.impl.AbstractProperty
 
setDocumentation(String) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
setDocumentation(String) - Method in class ca.nengo.model.impl.AbstractNode
 
setDocumentation(String) - Method in class ca.nengo.model.impl.FunctionInput
 
setDocumentation(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
setDocumentation(String) - Method in class ca.nengo.model.impl.PassthroughNode
 
setDocumentation(String) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
setDocumentation(String) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
setDocumentation(String) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
setDocumentation(String) - Method in interface ca.nengo.model.Node
 
setDynamics(LinearSystem) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
setDynamics(DynamicalSystem) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
setEnabled(boolean) - Method in class ca.nengo.model.nef.impl.BiasTermination
 
setEncoderFactory(VectorGenerator) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
setEncoderFactory(VectorGenerator) - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
setEncoders(float[][]) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
setEnsemble(String) - Method in exception ca.nengo.model.SimulationException
 
setEnsembleFactory(NEFEnsembleFactory) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
setEnsembleFactory(NEFEnsembleFactory) - Method in interface ca.nengo.model.nef.NEFEnsemble
Gives the ensemble a reference to the factory used to created it (useful for adding more neurons later)
setEvalPointFactory(VectorGenerator) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
setEvalPointFactory(VectorGenerator) - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
setEvalPoints(float[][]) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
Note: by-products of decoding are sometimes cached, so if these are changed it may be necessary to call setReuseApproximators(false) for the change to take effect.
setExcitation(float) - Method in class ca.nengo.model.muscle.impl.HillMuscle
 
setExpression(String) - Method in class ca.nengo.math.impl.PostfixFunction
 
setFrequencies(float[][]) - Method in class ca.nengo.math.impl.FourierFunction
 
setFrequency(float) - Method in class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF
 
setFunction(Function) - Method in class ca.nengo.math.impl.NumericallyDifferentiableFunction
 
setFunction(AbstractRealLearningFunction) - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
setFunctionOne(Function) - Method in class ca.nengo.math.impl.Convolution
 
setFunctions(Function[]) - Method in class ca.nengo.model.impl.FunctionInput
 
setFunctionTwo(Function) - Method in class ca.nengo.math.impl.Convolution
 
setGenerator(SpikeGenerator) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
setGeneratorFactory(SpikeGeneratorFactory) - Method in class ca.nengo.model.neuron.impl.SpikingNeuronFactory
 
setGPU(boolean) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
setHigh(float) - Method in class ca.nengo.math.impl.IndicatorPDF
 
setHigh(float) - Method in class ca.nengo.math.impl.SigmoidFunction
 
setIcon(Class<?>, Icon) - Method in class ca.nengo.config.IconRegistry
 
setIcon(Class<?>, String) - Method in class ca.nengo.config.IconRegistry
 
setIdentityDimension(int) - Method in class ca.nengo.math.impl.IdentityFunction
 
setIncN(PDF) - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
setIncN(PDF) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
setIncN(float) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
setIndex(int) - Method in class ca.nengo.config.ui.ConfigurationTreeModel.Value
 
setInflection(float) - Method in class ca.nengo.math.impl.SigmoidFunction
 
setInflection(PDF) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidFactory
 
setInitialState(float[][]) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
setInputDimension(int) - Method in class ca.nengo.dynamics.impl.LTISystem
 
setInputs(float, float) - Method in class ca.nengo.model.muscle.impl.HillMuscle
 
setInserter(Method, Method, Method) - Method in class ca.nengo.config.impl.ListPropertyImpl
 
setIntegrator(Integrator) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
setIntegrator(SynapticIntegrator) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
setIntegratorFactory(SynapticIntegratorFactory) - Method in class ca.nengo.model.neuron.impl.SpikingNeuronFactory
 
setIntercept(PDF) - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
setIntercept(PDF) - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
setIntercept(PDF) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearFactory
 
setLabel(String) - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
setLabel(int, String) - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
setLearning(boolean) - Method in class ca.nengo.model.impl.PlasticEnsembleImpl
 
setLearningRate(float) - Method in class ca.nengo.model.plasticity.impl.AbstractRealLearningFunction
 
setLearningRate(float) - Method in class ca.nengo.model.plasticity.impl.AbstractSpikeLearningFunction
 
setLength(float) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
setLength(float) - Method in interface ca.nengo.model.muscle.SkeletalMuscle
 
setLow(float) - Method in class ca.nengo.math.impl.IndicatorPDF
 
setLow(float) - Method in class ca.nengo.math.impl.SigmoidFunction
 
setMap(float[]) - Method in class ca.nengo.math.impl.LinearFunction
 
setMaxIterations(int) - Method in class ca.nengo.math.impl.GradientDescentApproximator
 
setMaxRate(PDF) - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
setMaxRate(PDF) - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
setMaxRate(PDF) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearFactory
 
setMaxRate(PDF) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidFactory
 
setMaxTimeStep(float) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
setMaxTimeStep(float) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator.Factory
 
setMaxTimeStep(float) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
setMean(float) - Method in class ca.nengo.math.impl.GaussianPDF
 
setMetaData(String, Object) - Method in class ca.nengo.model.impl.NetworkImpl
 
setMetaData(String, Object) - Method in interface ca.nengo.model.Network
 
setMinIntraSpikeTime(float) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
setMode(SimulationMode) - Method in class ca.nengo.model.impl.AbstractEnsemble
When this method is called, setMode(...) is called on each Node in the Ensemble.
setMode(SimulationMode) - Method in class ca.nengo.model.impl.AbstractNode
 
setMode(SimulationMode) - Method in class ca.nengo.model.impl.EnsembleImpl
This Ensemble does not support SimulationMode.DIRECT.
setMode(SimulationMode) - Method in class ca.nengo.model.impl.FunctionInput
This call has no effect.
setMode(SimulationMode) - Method in class ca.nengo.model.impl.NetworkImpl
 
setMode(SimulationMode) - Method in class ca.nengo.model.impl.PassthroughNode
Does nothing (only DEFAULT mode is supported).
setMode(SimulationMode) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
setMode(SimulationMode) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
setMode(SimulationMode) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
setMode(SimulationMode) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
setMode(SimulationMode) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
DEFAULT and RATE are supported.
setMode(SimulationMode) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
setMode(SimulationMode) - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
setMode(SimulationMode) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
setMode(SimulationMode) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
 
setMode(SimulationMode) - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator
 
setMode(SimulationMode) - Method in class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin
Need this to fix bug where the generator's mode is changed, but myOutput is still of the type of the old mode
setMode(SimulationMode) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
setMode(SimulationMode) - Method in interface ca.nengo.model.SimulationMode.ModeConfigurable
Sets the object to run in either the given mode or the closest mode that it supports (all ModeConfigurables must support SimulationMode.DEFAULT, and must default to this mode).
setModifiers(Method, Method) - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
Sets optional methods used to make the property mutable.
setModTerminationState(String, InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule.NullRule
Does nothing.
setModTerminationState(String, InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
setModTerminationState(String, InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
setModTerminationState(String, InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
setModTerminationState(String, InstantaneousOutput, float) - Method in interface ca.nengo.model.plasticity.PlasticityRule
Provides potentially modulatory input to the rule.
setModTermName(String) - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
setModTermName(String) - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
setModulatory(boolean) - Method in class ca.nengo.model.impl.BasicTermination
 
setModulatory(boolean) - Method in class ca.nengo.model.impl.EnsembleTermination
 
setModulatory(boolean) - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
setModulatory(boolean) - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
setModulatory(boolean) - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
setModulatory(boolean) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
setModulatory(boolean) - Method in interface ca.nengo.model.Termination
 
setMyMode(SimulationMode) - Method in class ca.nengo.model.impl.NetworkImpl
 
setName(String) - Method in class ca.nengo.config.impl.AbstractProperty
 
setName(String) - Method in interface ca.nengo.config.Property
 
setName(String) - Method in class ca.nengo.config.ui.ConfigurationTreeModel.Value
 
setName(String) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
setName(String) - Method in class ca.nengo.model.impl.AbstractNode
 
setName(String) - Method in class ca.nengo.model.impl.BasicOrigin
 
setName(String) - Method in class ca.nengo.model.impl.FunctionInput
 
setName(String) - Method in class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
setName(String) - Method in class ca.nengo.model.impl.NetworkImpl
 
setName(String) - Method in class ca.nengo.model.impl.PassthroughNode
 
setName(String) - Method in class ca.nengo.model.muscle.impl.LinkSegmentModelImpl
 
setName(String) - Method in class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
setName(String) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
setName(String) - Method in interface ca.nengo.model.Node
 
setName(String) - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
setName(String) - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
setNeurons(int) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
TODO: figure out why I have to add these so that it will show up in the Configure menu (nodeCount doens't appear for some reason)
setNode(Node) - Method in class ca.nengo.model.impl.BasicOrigin
 
setNode(Node) - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
setNode(Node) - Method in class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
setNode(Node) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
setNode(Node) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator
 
setNode(Node) - Method in interface ca.nengo.model.neuron.SynapticIntegrator
This method should be called by the neuron that incorporates this SynapticIntegrator (Terminations need a reference to this).
setNodeCount(int) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
setNodeCount(int) - Method in interface ca.nengo.model.nef.NEFEnsemble
 
setNodeFactory(NodeFactory) - Method in class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl
 
setNodeFactory(NodeFactory) - Method in interface ca.nengo.model.nef.NEFEnsembleFactory
 
setNoise(float) - Method in class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
setNoise(Noise) - Method in class ca.nengo.model.impl.BasicOrigin
Note that noise is only applied to RealOutput.
setNoise(Noise) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
setNoise(Noise) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
setNoise(Noise) - Method in interface ca.nengo.model.Noise.Noisy
 
setNSV(int) - Method in class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
setNumDiscontinuities(int) - Method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
setNumPoints(int) - Method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
If this method is used to increase the number of interpolation points, new points are set to equal what was previously the last point.
setNumThreads(int) - Static method in class ca.nengo.util.impl.NodeThreadPool
 
setObject(Object) - Method in class ca.nengo.config.ui.ConfigurationTreeModel.Value
 
setOmega(float) - Method in class ca.nengo.math.impl.SineFunction
 
setOnInSpike(AbstractSpikeLearningFunction) - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
setOnOutSpike(AbstractSpikeLearningFunction) - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
setOnSurface(boolean) - Method in class ca.nengo.util.impl.RandomHypersphereVG
 
setOrder(int) - Method in class ca.nengo.math.impl.Polynomial
 
setOriginName(String) - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
setOriginName(String) - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
setOriginState(String, InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule.NullRule
Does nothing.
setOriginState(String, InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
setOriginState(String, InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.RealPlasticityRule
 
setOriginState(String, InstantaneousOutput, float) - Method in class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
setOriginState(String, InstantaneousOutput, float) - Method in interface ca.nengo.model.plasticity.PlasticityRule
Provides state or functional output, which may serve as an indication of postsynaptic activity (used in Hebbian learning).
setOutputDimension(int) - Method in class ca.nengo.dynamics.impl.LTISystem
 
setOutputUnits(int, Units) - Method in class ca.nengo.dynamics.impl.LTISystem
 
setPeak(float) - Method in class ca.nengo.math.impl.GaussianPDF
 
setPhases(float[][]) - Method in class ca.nengo.math.impl.FourierFunction
 
setPlasticityInterval(float) - Method in class ca.nengo.model.impl.PlasticEnsembleImpl
 
setPlasticityInterval(float) - Method in interface ca.nengo.model.PlasticEnsemble
 
setPlasticityRule(String, PlasticityRule) - Method in class ca.nengo.model.impl.PlasticEnsembleImpl
Sets the given plasticity rule for this Ensemble.
setPlasticityRule(String, PlasticityRule) - Method in interface ca.nengo.model.PlasticEnsemble
 
setPoints(int) - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.EvalPointFactory
 
setPositive(boolean) - Method in class ca.nengo.util.impl.Rectifier
 
setPreset(IzhikevichSpikeGenerator.Preset) - Method in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
 
setProxy(ConfigurationChangeListener.EditorProxy) - Method in class ca.nengo.config.ui.ConfigurationChangeListener
Called by a ConfigurationHandler's editor.
setQuiet(boolean) - Method in class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
setRadialInput(float) - Method in interface ca.nengo.model.nef.NEFNode
 
setRadialInput(float) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
setRadii(float[]) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
setRadius(float) - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.EncoderFactory
 
setRadius(float) - Method in class ca.nengo.math.impl.IndependentDimensionApproximator.EvalPointFactory
 
setRadius(float) - Method in class ca.nengo.util.impl.RandomHypersphereVG
 
setRateFunction(Function) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator
 
setRateFunction(Function) - Method in class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator
 
setRealRule(PlasticityRule) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
setRectified(boolean) - Method in class ca.nengo.math.impl.LinearFunction
 
setRectified(boolean) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearFactory
 
setRectified(VectorGenerator) - Method in class ca.nengo.util.impl.Rectifier
 
setReuseApproximators(boolean) - Method in class ca.nengo.model.nef.impl.NEFEnsembleImpl
 
setRowHeight(int) - Method in class ca.nengo.config.ui.AquaTreeUI
 
setSamplingRate(float) - Method in class ca.nengo.util.impl.ProbeImpl
 
setSamplingRate(float) - Method in interface ca.nengo.util.Probe
 
setScale(float) - Method in class ca.nengo.model.neuron.impl.SpikingNeuron
 
setScalePeakWithVariance(boolean) - Method in class ca.nengo.math.impl.GaussianPDF
 
setScaling(DecodedTermination) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
setSeed(long) - Static method in class ca.nengo.math.PDFTools
 
setSeriesDimension(int) - Method in class ca.nengo.math.impl.TimeSeriesFunction
 
setSetter(Method) - Method in class ca.nengo.config.impl.ListPropertyImpl
 
setSimulator(Simulator) - Method in class ca.nengo.model.impl.NetworkImpl
 
setSimulator(Simulator) - Method in interface ca.nengo.model.Network
 
setSlope(float) - Method in class ca.nengo.math.impl.SigmoidFunction
 
setSlope(PDF) - Method in class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidFactory
 
setSpikePattern(float[], float) - Method in class ca.nengo.model.impl.AbstractEnsemble
 
setSpikeRule(PlasticityRule) - Method in class ca.nengo.model.plasticity.impl.CompositePlasticityRule
 
setSpikeThreshold(float) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
setStartingCoefficients(float[]) - Method in class ca.nengo.math.impl.GradientDescentApproximator
 
setState(float[]) - Method in interface ca.nengo.dynamics.DynamicalSystem
 
setState(float[]) - Method in class ca.nengo.dynamics.impl.AbstractDynamicalSystem
 
setState(float[]) - Method in class ca.nengo.dynamics.impl.LTISystem
 
setState(float[]) - Method in class ca.nengo.model.muscle.impl.HillMuscle.Dynamics
 
setStateDimension(int) - Method in class ca.nengo.dynamics.impl.LTISystem
 
setStaticBias(float[]) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
setStepSize(float) - Method in class ca.nengo.dynamics.impl.EulerIntegrator
 
setStepSize(float) - Method in class ca.nengo.math.impl.Convolution
 
setStepSize(float) - Method in class ca.nengo.model.impl.NetworkImpl
 
setSTPDynamics(DynamicalSystem) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
setSTPDynamics(DynamicalSystem) - Method in interface ca.nengo.model.plasticity.ShortTermPlastic
 
setTau(float) - Method in class ca.nengo.math.impl.ExponentialPDF
 
setTau(float) - Method in class ca.nengo.model.impl.BasicTermination
 
setTau(float) - Method in class ca.nengo.model.impl.EnsembleTermination
 
setTau(float) - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
setTau(float) - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
setTau(float) - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
setTau(float) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
setTau(float) - Method in interface ca.nengo.model.Termination
 
setTauN(float) - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
setTauN(PDF) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
setTauN(float) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
setTauRC(float) - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
setTauRC(PDF) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
setTauRC(float) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
setTauRC(float) - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
setTauRC(PDF) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator.Factory
 
setTauRC(float) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
setTauRef(float) - Method in class ca.nengo.model.neuron.impl.ALIFNeuronFactory
 
setTauRef(PDF) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory
 
setTauRef(float) - Method in class ca.nengo.model.neuron.impl.ALIFSpikeGenerator
 
setTauRef(float) - Method in class ca.nengo.model.neuron.impl.LIFNeuronFactory
 
setTauRef(PDF) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator.Factory
 
setTauRef(float) - Method in class ca.nengo.model.neuron.impl.LIFSpikeGenerator
 
setTime(float) - Method in class ca.nengo.model.nef.impl.DecodableEnsembleImpl
Allows subclasses to set the simulation time, which is used to support Probeable.
setTimeSeries(TimeSeries) - Method in class ca.nengo.math.impl.TimeSeriesFunction
 
setTimeSeries(TimeSeries) - Method in class ca.nengo.util.impl.LinearInterpolatorND
 
setTimeSeries(TimeSeries1D) - Method in interface ca.nengo.util.Interpolator
 
setTimeSeries(TimeSeries) - Method in interface ca.nengo.util.InterpolatorND
 
setTolerance(float) - Method in class ca.nengo.dynamics.impl.RK45Integrator
 
setTolerance(float) - Method in class ca.nengo.math.impl.GradientDescentApproximator
 
setTransform(float[][]) - Method in class ca.nengo.model.impl.PlasticEnsembleTermination
 
setTransform(float[][]) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
setTransform(float[][]) - Method in interface ca.nengo.model.PlasticTermination
 
setTransientTime(float) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
setUnits(Units) - Method in class ca.nengo.model.impl.BasicOrigin
 
setUnits(Units) - Method in class ca.nengo.model.neuron.impl.LinearSynapticIntegrator.Factory
 
setUnits(Units) - Method in class ca.nengo.util.impl.TimeSeries1DImpl
 
setUnits(int, Units) - Method in class ca.nengo.util.impl.TimeSeriesImpl
 
setUseGPU(boolean) - Static method in class ca.nengo.util.impl.GPUNodeThreadPool
 
setUserInterface(boolean) - Static method in class ca.nengo.util.Environment
 
setValue(int, Object) - Method in class ca.nengo.config.impl.ListPropertyImpl
 
setValue(String, Object) - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
setValue(Object) - Method in class ca.nengo.config.impl.NamedValuePropertyImpl
 
setValue(Object) - Method in class ca.nengo.config.impl.SingleValuedPropertyImpl
By default, attempts to call method setX(y) on Configurable, where X is the name of the property (with first letter capitalized) and y is the value (changed to a primitive if it's a primitive wrapper).
setValue(int, Object) - Method in class ca.nengo.config.impl.TemplateArrayProperty
 
setValue(Object) - Method in class ca.nengo.config.impl.TemplateProperty
 
setValue(int, Object) - Method in interface ca.nengo.config.ListProperty
 
setValue(String, Object) - Method in interface ca.nengo.config.NamedValueProperty
Sets a value by name.
setValue(Object) - Method in interface ca.nengo.config.NamedValueProperty
Sets an automatically-named value
setValue(Object) - Method in interface ca.nengo.config.SingleValuedProperty
 
setValue(TreePath, Object) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
setValue(float) - Method in class ca.nengo.math.impl.ConstantFunction
 
setValues(float[]) - Method in class ca.nengo.math.impl.PiecewiseConstantFunction
 
setValues(float, float, float[]) - Method in class ca.nengo.model.impl.BasicOrigin
This method is normally called by the Node that contains this Origin, to set the input that is read by other nodes from getValues().
setValues(InstantaneousOutput) - Method in class ca.nengo.model.impl.BasicOrigin
This method is normally called by the Node that contains this Origin, to set the input that is read by other nodes from getValues().
setValues(InstantaneousOutput) - Method in class ca.nengo.model.impl.BasicTermination
 
setValues(InstantaneousOutput) - Method in class ca.nengo.model.impl.EnsembleTermination
 
setValues(InstantaneousOutput) - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
setValues(InstantaneousOutput) - Method in class ca.nengo.model.impl.NetworkImpl.TerminationWrapper
 
setValues(InstantaneousOutput) - Method in class ca.nengo.model.impl.PassthroughNode.PassthroughTermination
 
setValues(RealOutput) - Method in class ca.nengo.model.nef.impl.DecodedOrigin
 
setValues(InstantaneousOutput) - Method in class ca.nengo.model.nef.impl.DecodedTermination
 
setValues(InstantaneousOutput) - Method in interface ca.nengo.model.Termination
 
setVariance(float) - Method in class ca.nengo.math.impl.GaussianPDF
 
setVoltageDim(int) - Method in class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator
 
setWeights(float[]) - Method in class ca.nengo.model.impl.LinearExponentialTermination
 
setWindow(float) - Method in class ca.nengo.math.impl.Convolution
 
setWrappedOrigin(Origin) - Method in class ca.nengo.model.impl.NetworkImpl.OriginWrapper
 
setX(float[]) - Method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
setY(float[]) - Method in class ca.nengo.math.impl.LinearCurveFitter.InterpolatedFunction
 
shape(float[][], int, int) - Static method in class ca.nengo.util.MU
 
sharedInstance() - Static method in class ca.nengo.math.impl.DefaultFunctionInterpreter
 
ShortTermPlastic - Interface in ca.nengo.model.plasticity
Something (like a synapse) that is subject to short-term plasticity.
showChart(JFreeChart, String) - Method in class ca.nengo.plot.impl.DefaultPlotter
 
showDialog(Component, Class<?>, Class<?>) - Static method in class ca.nengo.config.ui.NewConfigurableDialog
Opens a NewConfigurableDialog through which the user can construct a new object, and returns the constructed object.
showHelp(String) - Static method in class ca.nengo.config.ConfigUtil
Displays given text in a help window.
showPlot(JPanel, String) - Method in class ca.nengo.plot.Plotter
Display a new plot.
SigmoidFunction - Class in ca.nengo.math.impl
A one-dimensional sigmoid function with configurable high and low values, slope, and inflection point.
SigmoidFunction() - Constructor for class ca.nengo.math.impl.SigmoidFunction
Default parameters (inflection=0; slope=1/4; low=0; high=1).
SigmoidFunction(float, float, float, float) - Constructor for class ca.nengo.math.impl.SigmoidFunction
 
SimpleFunctions - Class in ca.nengo.math.impl
A collection of Functions that do not have parameters.
SimpleFunctions() - Constructor for class ca.nengo.math.impl.SimpleFunctions
 
SimpleFunctions.Acos - Class in ca.nengo.math.impl
In radians.
SimpleFunctions.Acos() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Acos
 
SimpleFunctions.Asin - Class in ca.nengo.math.impl
In radians.
SimpleFunctions.Asin() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Asin
 
SimpleFunctions.Atan - Class in ca.nengo.math.impl
In radians.
SimpleFunctions.Atan() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Atan
 
SimpleFunctions.Cos - Class in ca.nengo.math.impl
In radians.
SimpleFunctions.Cos() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Cos
 
SimpleFunctions.Exp - Class in ca.nengo.math.impl
 
SimpleFunctions.Exp() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Exp
 
SimpleFunctions.Fold - Class in ca.nengo.math.impl
Computes the image of x0 \in \mathbb{R} in the quotient group \mathbb{R}/\mathbb{Z}.
SimpleFunctions.Fold() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Fold
 
SimpleFunctions.InverseNormal - Class in ca.nengo.math.impl
 
SimpleFunctions.InverseNormal() - Constructor for class ca.nengo.math.impl.SimpleFunctions.InverseNormal
 
SimpleFunctions.Ln - Class in ca.nengo.math.impl
 
SimpleFunctions.Ln() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Ln
 
SimpleFunctions.Log10 - Class in ca.nengo.math.impl
 
SimpleFunctions.Log10() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Log10
 
SimpleFunctions.Log2 - Class in ca.nengo.math.impl
 
SimpleFunctions.Log2() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Log2
 
SimpleFunctions.Max - Class in ca.nengo.math.impl
 
SimpleFunctions.Max() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Max
 
SimpleFunctions.Min - Class in ca.nengo.math.impl
 
SimpleFunctions.Min() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Min
 
SimpleFunctions.Normal - Class in ca.nengo.math.impl
 
SimpleFunctions.Normal() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Normal
 
SimpleFunctions.Pow - Class in ca.nengo.math.impl
 
SimpleFunctions.Pow() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Pow
 
SimpleFunctions.Sin - Class in ca.nengo.math.impl
In radians.
SimpleFunctions.Sin() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Sin
 
SimpleFunctions.Sqrt - Class in ca.nengo.math.impl
 
SimpleFunctions.Sqrt() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Sqrt
 
SimpleFunctions.Tan - Class in ca.nengo.math.impl
In radians.
SimpleFunctions.Tan() - Constructor for class ca.nengo.math.impl.SimpleFunctions.Tan
 
SimpleLTISystem - Class in ca.nengo.dynamics.impl
A linear time-invariant system with the following properties: A diagonal dynamics matrix A zero passthrough matrix This implementation will run faster than an instance of the superclass that has these properties.
SimpleLTISystem(float[], float[][], float[][], float[], Units[]) - Constructor for class ca.nengo.dynamics.impl.SimpleLTISystem
See also LTISystem.
SimpleLTISystem(int, int, int) - Constructor for class ca.nengo.dynamics.impl.SimpleLTISystem
Creates an appropriately-dimensioned system with all-zero matrices, so that elements can be changed later.
SimulationException - Exception in ca.nengo.model
A problem encountered while trying to run a simulation.
SimulationException(String) - Constructor for exception ca.nengo.model.SimulationException
 
SimulationException(Throwable) - Constructor for exception ca.nengo.model.SimulationException
 
SimulationException(String, Throwable) - Constructor for exception ca.nengo.model.SimulationException
 
SimulationMode - Enum in ca.nengo.model
A SimulationMode is a way in which a Neuron or Ensemble can be simulated.
SimulationMode.ModeConfigurable - Interface in ca.nengo.model
Something that has runs in different SimulationModes.
Simulator - Interface in ca.nengo.sim
Runs simulations of a Network.
SimulatorEvent - Class in ca.nengo.sim
 
SimulatorEvent(float, SimulatorEvent.Type) - Constructor for class ca.nengo.sim.SimulatorEvent
 
SimulatorEvent.Type - Enum in ca.nengo.sim
 
SimulatorListener - Interface in ca.nengo.sim
 
SineFunction - Class in ca.nengo.math.impl
Function wrapper for sin(omega x), where x is in radians and omega is the angular frequency.
SineFunction() - Constructor for class ca.nengo.math.impl.SineFunction
Uses default angular frequency of 2pi and amplitude of 1
SineFunction(float) - Constructor for class ca.nengo.math.impl.SineFunction
Uses default amplitude of 1.
SineFunction(float, float) - Constructor for class ca.nengo.math.impl.SineFunction
 
SingleValuedProperty - Interface in ca.nengo.config
A Property that has a single value.
SingleValuedPropertyImpl - Class in ca.nengo.config.impl
Default implementation of single-valued Properties.
SingleValuedPropertyImpl(Configuration, String, Class<?>, Method) - Constructor for class ca.nengo.config.impl.SingleValuedPropertyImpl
Constructor for immutable single-valued properties.
SingleValuedPropertyImpl(Configuration, String, Class<?>, Method, Method) - Constructor for class ca.nengo.config.impl.SingleValuedPropertyImpl
Constructor for mutable single-valued properties.
SkeletalMuscle - Interface in ca.nengo.model.muscle
A model of a skeletal muscle or muscle group.
SkeletalMuscleImpl - Class in ca.nengo.model.muscle.impl
Basic SkeletalMuscle implementation with unspecified activation-force dynamics.
SkeletalMuscleImpl(String, DynamicalSystem) - Constructor for class ca.nengo.model.muscle.impl.SkeletalMuscleImpl
 
sleep() - Method in class ca.nengo.util.impl.GPUNodeThreadPool
 
sort(SpikePattern, Ensemble) - Static method in class ca.nengo.util.DataUtils
Attempts to sort a SpikePattern by properties of the associated neurons.
SpikeGenerator - Interface in ca.nengo.model.neuron
Spike generation model, ie a component of a neuron model that receives driving current and generates spikes.
SpikeGeneratorFactory - Interface in ca.nengo.model.neuron.impl
Creates SpikeGenerators.
SpikeGeneratorOrigin - Class in ca.nengo.model.neuron.impl
An Origin that obtains output from an underlying SpikeGenerator.
SpikeGeneratorOrigin(Node, SpikeGenerator) - Constructor for class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin
 
SpikeOutput - Interface in ca.nengo.model
InstantaneousOutput consisting of spikes.
SpikeOutputImpl - Class in ca.nengo.model.impl
Default implementation of SpikeOutput.
SpikeOutputImpl(boolean[], Units, float) - Constructor for class ca.nengo.model.impl.SpikeOutputImpl
 
SpikePattern - Interface in ca.nengo.util
A temporal pattern of spiking in an Ensemble.
SpikePatternImpl - Class in ca.nengo.util.impl
Default implementation of SpikePattern.
SpikePatternImpl(int) - Constructor for class ca.nengo.util.impl.SpikePatternImpl
 
SpikePlasticityRule - Class in ca.nengo.model.plasticity.impl
A PlasticityRule that accepts spiking input.
SpikePlasticityRule(AbstractSpikeLearningFunction, AbstractSpikeLearningFunction, String, String) - Constructor for class ca.nengo.model.plasticity.impl.SpikePlasticityRule
 
SpikingNeuron - Class in ca.nengo.model.neuron.impl
A neuron model composed of a SynapticIntegrator and a SpikeGenerator.
SpikingNeuron(SynapticIntegrator, SpikeGenerator, float, float, String) - Constructor for class ca.nengo.model.neuron.impl.SpikingNeuron
Note: current = scale * (weighted sum of inputs at each termination) * (radial input) + bias.
SpikingNeuronFactory - Class in ca.nengo.model.neuron.impl
Creates spiking neurons by delegating to a SynapticIntegratorFactory and a SpikeGeneratorFactory.
SpikingNeuronFactory(SynapticIntegratorFactory, SpikeGeneratorFactory, PDF, PDF) - Constructor for class ca.nengo.model.neuron.impl.SpikingNeuronFactory
 
STATE_NAME - Static variable in class ca.nengo.model.impl.FunctionInput
 
StatefulIndexFinder - Class in ca.nengo.util.impl
An IndexFinder that searches linearly, starting where the last answer was.
StatefulIndexFinder(float[]) - Constructor for class ca.nengo.util.impl.StatefulIndexFinder
 
STATIC_ORIGIN_NAME - Static variable in interface ca.nengo.model.muscle.MuscleSpindle
 
STATIC_SPINDLE_ORIGIN - Static variable in interface ca.nengo.model.muscle.SkeletalMuscle
 
step(float, float) - Method in class ca.nengo.sim.impl.LocalSimulator
 
step(float, float) - Method in class ca.nengo.util.impl.GPUNodeThreadPool
 
step(float, float) - Method in class ca.nengo.util.impl.NodeThreadPool
 
StringHandler - Class in ca.nengo.config.handlers
ConfigurationHandler for String values.
StringHandler() - Constructor for class ca.nengo.config.handlers.StringHandler
 
stripSuffix(String, String) - Static method in class ca.nengo.config.ConfigUtil
 
StructuralException - Exception in ca.nengo.model
A structural problem in setting up a Network.
StructuralException(String) - Constructor for exception ca.nengo.model.StructuralException
 
StructuralException(Throwable) - Constructor for exception ca.nengo.model.StructuralException
 
StructuralException(String, Throwable) - Constructor for exception ca.nengo.model.StructuralException
 
subsample(TimeSeries, int) - Static method in class ca.nengo.util.DataUtils
Draws one of every period samples from a given TimeSeries.
subset(SpikePattern, int, int, int) - Static method in class ca.nengo.util.DataUtils
Extracts spikes of selected neurons from a given SpikePattern.
subset(SpikePattern, int[]) - Static method in class ca.nengo.util.DataUtils
Extracts spikes of selected neurons from a given SpikePattern.
sum(float[][], float[][]) - Static method in class ca.nengo.util.MU
 
sum(float[], float[]) - Static method in class ca.nengo.util.MU
 
sum(float[]) - Static method in class ca.nengo.util.MU
 
sumToIndex(float[], int) - Static method in class ca.nengo.util.MU
 
SynapticIntegrator - Interface in ca.nengo.model.neuron
Model of synaptic integration in a dendritic tree and soma.
SynapticIntegratorFactory - Interface in ca.nengo.model.neuron.impl
Creates SynapticIntegrators.

T

TemplateArrayProperty - Class in ca.nengo.config.impl
A ListProperty that is not attached to getter/setter methods on an underlying class, but instead stores its values internally.
TemplateArrayProperty(Configuration, String, Class<?>) - Constructor for class ca.nengo.config.impl.TemplateArrayProperty
 
TemplateProperty - Class in ca.nengo.config.impl
A SingleValuedProperty that is not attached to getter/setter methods on an underlying class, but instead stores its value internally.
TemplateProperty(Configuration, String, Class<?>, Object) - Constructor for class ca.nengo.config.impl.TemplateProperty
 
TERMINATION - Static variable in class ca.nengo.model.impl.PassthroughNode
 
Termination - Interface in ca.nengo.model
An destination for information in a circuit model.
TimeSeries - Interface in ca.nengo.util
A series of vector values at ordered points in time.
TimeSeries1D - Interface in ca.nengo.util
A TimeSeries that consists of 1-dimensional values, with convenience methods for accessing 1D values and units.
TimeSeries1DImpl - Class in ca.nengo.util.impl
Default implementation of TimeSeries.
TimeSeries1DImpl(float[], float[], Units) - Constructor for class ca.nengo.util.impl.TimeSeries1DImpl
 
TimeSeriesFunction - Class in ca.nengo.math.impl
A Function based on interpolation of a TimeSeries.
TimeSeriesFunction(TimeSeries, int) - Constructor for class ca.nengo.math.impl.TimeSeriesFunction
 
TimeSeriesImpl - Class in ca.nengo.util.impl
Default implementation of TimeSeriesND.
TimeSeriesImpl(float[], float[][], Units[]) - Constructor for class ca.nengo.util.impl.TimeSeriesImpl
 
TimeSeriesImpl(float[], float[][], Units[], String[]) - Constructor for class ca.nengo.util.impl.TimeSeriesImpl
 
toArray() - Method in class ca.nengo.util.MU.MatrixExpander
 
toArray() - Method in class ca.nengo.util.MU.VectorExpander
 
toString(Object) - Method in interface ca.nengo.config.ConfigurationHandler
 
toString(Object) - Method in class ca.nengo.config.handlers.BaseHandler
 
toString(Object) - Method in class ca.nengo.config.handlers.MatrixHandler
 
toString(float[][], char, String) - Static method in class ca.nengo.config.handlers.MatrixHandler
 
toString(Object) - Method in class ca.nengo.config.handlers.VectorHandler
 
toString(Object) - Method in class ca.nengo.config.MainHandler
 
toString() - Method in class ca.nengo.config.ui.ConfigurationTreeModel.NullValue
 
toString() - Method in enum ca.nengo.model.Units
 
toString(float[][], int) - Static method in class ca.nengo.util.MU
TODO: handle exponential notation
transpose(float[][]) - Static method in class ca.nengo.util.MU
 
turnOffMultithreading() - Static method in class ca.nengo.util.impl.NodeThreadPool
 
TYPES_LOCATION_PROPERTY - Static variable in class ca.nengo.config.ClassRegistry
 

U

U - Static variable in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
Recovery state variable
uniform(Units, int) - Static method in enum ca.nengo.model.Units
Returns an array of Units in which all Units are the same.
uniform(int, int, float) - Static method in class ca.nengo.util.MU
 
Units - Enum in ca.nengo.model
Models units for physical quantities.
UnitsHandler - Class in ca.nengo.config.handlers
ConfigurationHandler for Units values.
UnitsHandler() - Constructor for class ca.nengo.config.handlers.UnitsHandler
 
updateCurrent(boolean, float, float) - Method in class ca.nengo.model.impl.LinearExponentialTermination
Updates net post-synaptic current for this Termination according to new inputs and exponential dynamics applied to previous inputs.
USER_INTERFACE - Static variable in class ca.nengo.util.Environment
Name of system property underlying inUserInterface()

V

V - Static variable in class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator
Voltage state variable
valueForPathChanged(TreePath, Object) - Method in class ca.nengo.config.ui.ConfigurationTreeModel
 
valueOf(String) - Static method in enum ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator.Preset
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum ca.nengo.model.SimulationMode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum ca.nengo.model.Units
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum ca.nengo.sim.SimulatorEvent.Type
Returns the enum constant of this type with the specified name.
values() - Static method in enum ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator.Preset
Returns an array containing the constants of this enum type, in the order they're declared.
values() - Static method in enum ca.nengo.model.SimulationMode
Returns an array containing the constants of this enum type, in the order they're declared.
values() - Static method in enum ca.nengo.model.Units
Returns an array containing the constants of this enum type, in the order they're declared.
values() - Static method in enum ca.nengo.sim.SimulatorEvent.Type
Returns an array containing the constants of this enum type, in the order they're declared.
variance(float[], float) - Static method in class ca.nengo.util.MU
 
VectorGenerator - Interface in ca.nengo.util
A tool for generating sets of uniformly or randomly distributed vectors.
VectorHandler - Class in ca.nengo.config.handlers
ConfigurationHandler for float[] values.
VectorHandler() - Constructor for class ca.nengo.config.handlers.VectorHandler
 
VisiblyMutable - Interface in ca.nengo.util
An object that fires an event when its properties change in such a way that it expects the user interface to display it differently.
VisiblyMutable.Event - Interface in ca.nengo.util
Encapsulates a change to a VisiblyMutable object.
VisiblyMutable.Listener - Interface in ca.nengo.util
A listener for changes to a VisiblyMutable object.
VisiblyMutable.NameChangeEvent - Interface in ca.nengo.util
Encapsulates a change in the name of a VisiblyMutable object.
VisiblyMutable.NodeRemovedEvent - Interface in ca.nengo.util
Encapsulates a "node removed" change in the VisiblyMutable object.
VisiblyMutableUtils - Class in ca.nengo.util
Utility methods for VisiblyMutable objects.
VisiblyMutableUtils() - Constructor for class ca.nengo.util.VisiblyMutableUtils
 

W

waitForThreads() - Method in class ca.nengo.util.impl.NodeThreadPool
 
WeightedCostApproximator - Class in ca.nengo.math.impl
A LinearApproximator in which error is evaluated at a fixed set of points, and the cost function that is minimized is a weighted integral of squared error.
WeightedCostApproximator(float[][], float[][], Function, float, int, boolean) - Constructor for class ca.nengo.math.impl.WeightedCostApproximator
 
WeightedCostApproximator(float[][], float[][], Function, float, int) - Constructor for class ca.nengo.math.impl.WeightedCostApproximator
 
WeightedCostApproximator.Factory - Class in ca.nengo.math.impl
An ApproximatorFactory that produces WeightedCostApproximators.
WeightedCostApproximator.Factory(float) - Constructor for class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
WeightedCostApproximator.Factory(float, boolean) - Constructor for class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
WeightedCostApproximator.Factory(float, int) - Constructor for class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
WeightedCostApproximator.Factory(float, int, boolean) - Constructor for class ca.nengo.math.impl.WeightedCostApproximator.Factory
 
WORKING_DIRECTORY - Static variable in class ca.nengo.util.Environment
Name of String property that contains path of user's working directory
write(File) - Method in class ca.nengo.io.MatlabExporter
Writes to given destination the data that have been added to this exporter.
WriteToDiskSimulatorListener - Class in ca.nengo.sim.impl
A method of writing to disk values being tracked by a probe.
WriteToDiskSimulatorListener(File, Probe, float) - Constructor for class ca.nengo.sim.impl.WriteToDiskSimulatorListener
 

X

X - Static variable in interface ca.nengo.model.nef.NEFEnsemble
Standard name for the Origin corresponding to the decoded estimate of the state variables that Ensemble represents (X is a standard name for state variables in state-space models).

Z

zero(int, int) - Static method in class ca.nengo.util.MU
 

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